RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 AVPP01185 164 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 LINC00614P0C842 121 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 CTRLP40313 264 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF80P51504 273 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF138P52744 262 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 BLCAPP62952 87 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 LBHQ53QV2 105 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF493Q6ZR52 646 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 IL17RELQ6ZVW7 336 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 OR4X2Q8NGF9 303 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 NPFFR1Q9GZQ6 430 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ASH1LQ9NR48 2969 aaKnown RBP6.34□□□□□ -1.39
VAMP3-201ENST00000054666 USP9XQ93008 2570 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-201ENST00000054666 CFAP46Q8IYW2 2715 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 TGFAP01135 160 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 TRBV12-3P01733 135 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 HIST1H1AQ02539 215 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-201ENST00000054666 TWIST1Q15672 202 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF738Q8NE65 137 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF580Q9UK33 172 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 TRAV8-2A0A0B4J237 113 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 IGHV1-24A0A0C4DH33 117 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 C20orf202A1L168 122 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 LEPROTL1O95214 131 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 CSN3P07498 182 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 SSTP61278 116 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 DEFB112Q30KQ8 113 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 LINC01559Q495D7 138 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 FA2HQ7L5A8 372 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 Q8N976 141 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 URB1-AS1Q96HZ7 61 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 A0A096LNT2 108 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 TMEM213A2RRL7 107 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 IGLV1-40P01703 118 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 IGLC6P0CF74 106 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 LOXL1Q08397 574 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-201ENST00000054666 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 FAM104BQ5XKR9 115 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 ZNF705AQ6ZN79 300 aaPredicted RBP6.33□□□□□ -1.4
VAMP3-201ENST00000054666 C9orf47Q6ZRZ4 202 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 ORMDL3Q8N138 153 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 MIEN1Q9BRT3 115 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 TMEM70Q9BUB7 260 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 AGPAT4-IT1Q9H0P7 198 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
VAMP3-201ENST00000054666 D6R8Y8 96 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
VAMP3-201ENST00000054666 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
VAMP3-201ENST00000054666 CFHR3Q02985 330 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 TDRG1Q3Y452 100 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 EBLN2Q6P2I7 272 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 Q6ZS46 218 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 AMN1Q8IY45 258 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 PRSS3P2Q8NHM4 247 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
VAMP3-201ENST00000054666 BEX4Q9NWD9 120 aaPredicted RBP6.32□□□□□ -1.4
VAMP3-201ENST00000054666 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 USP24Q9UPU5 2620 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 MYO18BQ8IUG5 2567 aa6.32□□□□□ -1.4
VAMP3-201ENST00000054666 MUC21A0A0G2JKD1 596 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 MUC21A0A140T8X8 626 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 C2orf70A6NJV1 201 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 RNF223E7ERA6 249 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 OVOL1O14753 267 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 FAM106AQ4KMX7 169 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 MUC21Q5SSG8 566 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 PEF1Q9UBV8 284 aaKnown RBP6.31□□□□□ -1.4
VAMP3-201ENST00000054666 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 VPS13CQ709C8 3753 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 FAM208BQ5VWN6 2430 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 M0R143 59 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 CKS2P33552 79 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 DEFB113Q30KQ7 82 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 SAMD13Q5VXD3 122 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 MRPL52Q86TS9 123 aaKnown RBP6.31□□□□□ -1.4
VAMP3-201ENST00000054666 MAPK1IP1LQ8NDC0 245 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 OR10AG1Q8NH19 301 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 C2orf88Q9BSF0 95 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 CNFNQ9BYD5 112 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 PPP1R14DQ9NXH3 145 aa6.31□□□□□ -1.4
VAMP3-201ENST00000054666 TMEM89A2RUT3 159 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 SRSF1Q07955 248 aaKnown RBP eCLIP6.3□□□□□ -1.4
VAMP3-201ENST00000054666 Q5PR19 223 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 SMIM15Q7Z3B0 74 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 LINC00477Q96M19 166 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 RHPN1-AS1Q9BWJ2 59 aa6.3□□□□□ -1.4
VAMP3-201ENST00000054666 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms