RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 IGFL4Q6B9Z1 124 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 ZNF503Q96F45 646 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 MAP6D1Q9H9H5 199 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 FAM74A7A6NL05 159 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 PDE6DO43924 150 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 NUTF2P61970 127 aaKnown RBP9.69□□□□□ -0.86
PHGDH-218ENST00000641491 UBE2G1P62253 170 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 BEAN1Q3B7T3 259 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 ACTL10Q5JWF8 245 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
PHGDH-218ENST00000641491 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 NDFIP1Q9BT67 221 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
PHGDH-218ENST00000641491 RBFOX3A6NFN3 312 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 SOCS3O14543 225 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 CD7P09564 240 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 AKR1C3P42330 323 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 CNN1P51911 297 aaKnown RBP9.68□□□□□ -0.86
PHGDH-218ENST00000641491 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 PEA15Q15121 130 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 CLLU1Q5K131 121 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 HIST1H2BAQ96A08 127 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 SRD5A3Q9H8P0 318 aa9.68□□□□□ -0.86
PHGDH-218ENST00000641491 TRAV8-2A0A0B4J237 113 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
PHGDH-218ENST00000641491 NDUFB4O95168 129 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 NMBP08949 121 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 CEBPGP53567 150 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
PHGDH-218ENST00000641491 GOLT1AQ6ZVE7 132 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 APRG1Q8IVJ8 170 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 FAM24BQ8N5W8 94 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 CYB561D1Q8N8Q1 229 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 ATG101Q9BSB4 218 aa9.67□□□□□ -0.86
PHGDH-218ENST00000641491 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
PHGDH-218ENST00000641491 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-218ENST00000641491 M0R3E3 92 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 PEX7O00628 323 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 RGS13O14921 159 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 HLA-DMBP28068 263 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 TSPOP30536 169 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 CCL20P78556 96 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 OR8A1Q8NGG7 326 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 SAV1Q9H4B6 383 aaPredicted RBP9.66□□□□□ -0.86
PHGDH-218ENST00000641491 EPDR1Q9UM22 224 aa9.66□□□□□ -0.86
PHGDH-218ENST00000641491 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 KNCNA6PVL3 124 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 DIRC3C9JPN6 131 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 S100A9P06702 114 aaKnown RBP9.65□□□□□ -0.86
PHGDH-218ENST00000641491 ATP5G3P48201 142 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 APOC4P55056 127 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 GNG5P63218 68 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 IFITM2Q01629 132 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 C20orf173Q96LM9 149 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 TREM1Q9NP99 234 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 VWFP04275 2813 aa9.65□□□□□ -0.86
PHGDH-218ENST00000641491 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-218ENST00000641491 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-218ENST00000641491 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-218ENST00000641491 TCRAP04437 139 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
PHGDH-218ENST00000641491 LEPP41159 167 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 PMS2P11Q13670 270 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
PHGDH-218ENST00000641491 A0A0J9YX75 114 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 F6UB75 175 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF506Q5JVG8 444 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-218ENST00000641491 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
PHGDH-218ENST00000641491 SCO2A0A1W2PP80 73 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 AMBPP02760 352 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 CT45A10P0DMU9 189 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF138P52744 262 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 ZNF674Q2M3X9 581 aa9.62□□□□□ -0.87
PHGDH-218ENST00000641491 KPRPQ5T749 579 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-218ENST00000641491 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms