RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 KLF12Q9Y4X4 402 aa5.25□□□□□ -1.57
SCARB2-226ENST00000640916 IGHV3-38A0A0C4DH36 116 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 C3orf85A0A1B0GTC6 90 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 RGS10O43665 173 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 GYPEP15421 78 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 S100GP29377 79 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 PIGPP57054 158 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 FGL1Q08830 312 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 PRSS48Q7RTY5 328 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 THAP8Q8NA92 274 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 ZNF431Q8TF32 576 aaPredicted RBP5.24□□□□□ -1.57
SCARB2-226ENST00000640916 TRGV9Q99603 122 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 PAXXQ9BUH6 204 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 HSPB7Q9UBY9 170 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 SLC45A2Q9UMX9 530 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 TPRKBQ9Y3C4 175 aa5.24□□□□□ -1.57
SCARB2-226ENST00000640916 STRAPQ9Y3F4 350 aaKnown RBP5.24□□□□□ -1.57
SCARB2-226ENST00000640916 TRAV12-3A0A0B4J271 114 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 CEBPZOSA8MTT3 80 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 PRAC2D3DTV9 90 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 E5RGE8 158 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 SRIP30626 198 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 GPX4P36969 197 aaPredicted RBP5.23□□□□□ -1.57
SCARB2-226ENST00000640916 PTTG1IPP53801 180 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 TSPAN5P62079 268 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 MORN5Q5VZ52 161 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 BLNKQ8WV28 456 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 RPUSD4Q96CM3 377 aaKnown RBP5.23□□□□□ -1.57
SCARB2-226ENST00000640916 GPR82Q96P67 336 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 VGLL1Q99990 258 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 PYGO2Q9BRQ0 406 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 CTDSP1Q9GZU7 261 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 CACNG5Q9UF02 275 aa5.23□□□□□ -1.57
SCARB2-226ENST00000640916 A0A087X0K7 114 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 F8WDY8 70 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 H3BRN7 92 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
SCARB2-226ENST00000640916 ATG12O94817 140 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 CDS2O95674 445 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 S100A9P06702 114 aaKnown RBP5.22□□□□□ -1.57
SCARB2-226ENST00000640916 CT45A10P0DMU9 189 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 SDC2P34741 201 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 CAMPP49913 170 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 TCL1AP56279 114 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 SLAQ13239 276 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 MEF2DQ14814 521 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 TRIM16LQ309B1 348 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 LHFPL1Q86WI0 220 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 FAM219AQ8IW50 185 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 MRPL16Q9NX20 251 aaKnown RBP5.22□□□□□ -1.57
SCARB2-226ENST00000640916 RAB26Q9ULW5 256 aa5.22□□□□□ -1.57
SCARB2-226ENST00000640916 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 RNF222A6NCQ9 220 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 IGHV3-33P01772 117 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 FABP1P07148 127 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 IGHV3-30-3P0DP02 117 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 PGAM2P15259 253 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 TDRG1Q3Y452 100 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 ANXA2RQ3ZCQ2 193 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 CCDC190Q86UF4 302 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 NOXA1Q86UR1 476 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 SELENOHQ8IZQ5 122 aaKnown RBP5.21□□□□□ -1.58
SCARB2-226ENST00000640916 OCC1Q8TAD7 63 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 GPX8Q8TED1 209 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 GLYATL2Q8WU03 294 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 BAALCQ8WXS3 180 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 RBPMSQ93062 196 aaKnown RBP5.21□□□□□ -1.58
SCARB2-226ENST00000640916 ZNF486Q96H40 463 aaPredicted RBP5.21□□□□□ -1.58
SCARB2-226ENST00000640916 LINC01600Q96MT4 127 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 TP53TG3Q9ULZ0 132 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 U3KQ87 197 aa5.21□□□□□ -1.58
SCARB2-226ENST00000640916 C5orf51A6NDU8 294 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 RBFOX3A6NFN3 312 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 SFTA3P0C7M3 94 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 ORM2P19652 201 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 RCVRNP35243 200 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 CTAG1AP78358 180 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 MXD1Q05195 221 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 NEDD8Q15843 81 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 GGNBP1Q5YKI7 109 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 LGI3Q8N145 548 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 ZNF680Q8NEM1 530 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 ZNF479Q96JC4 524 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 SLC35E1Q96K37 410 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 SHANK2-AS3Q9BTD1 123 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 TMEM222Q9H0R3 208 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 TMEM56-RWDD3S4R434 201 aa5.2□□□□□ -1.58
SCARB2-226ENST00000640916 PRSS46E5RG02 174 aa5.19□□□□□ -1.58
SCARB2-226ENST00000640916 GABARAPH6UMI1 98 aa5.19□□□□□ -1.58
SCARB2-226ENST00000640916 PANO1I0J062 215 aa5.19□□□□□ -1.58
SCARB2-226ENST00000640916 GABARAPO95166 117 aa5.19□□□□□ -1.58
SCARB2-226ENST00000640916 CFDP00746 253 aaPredicted RBP5.19□□□□□ -1.58
SCARB2-226ENST00000640916 RPL7P18124 248 aaKnown RBP5.19□□□□□ -1.58
SCARB2-226ENST00000640916 TNFSF8P32971 234 aa5.19□□□□□ -1.58
SCARB2-226ENST00000640916 PRSS3P35030 304 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms