RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 CSPG4Q6UVK1 2322 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 MXRA5Q9NR99 2828 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 A6NDN8 102 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 CYB5BO43169 146 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 CST7O76096 145 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 FGF7P21781 194 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 KIR2DS2P43631 304 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF429Q86V71 674 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 C11orf72Q8NBR9 251 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 OR13D1Q8NGV5 346 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 TMEM133Q9H2Q1 129 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 A0A087WW49 117 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TRAV40A0A0B4J280 105 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 ODF3BA8MYP8 253 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BKO60814 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BJP06899 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BOP23527 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BBP33778 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 DYNLT3P51808 116 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BDP58876 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BCP62807 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST2H2BEQ16778 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TAF15Q92804 592 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BHQ93079 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BNQ99877 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 HIST1H2BMQ99879 126 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 C11orf1Q9H5F2 150 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 IDI2-AS1Q9NZ38 188 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 UFC1Q9Y3C8 167 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 FN1P02751 2386 aaKnown RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 NF1P21359 2839 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 A0A1B0GW64 132 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 PITX3O75364 302 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 MMP23AO75900 390 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TRGC2P03986 189 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 MDKP21741 143 aaPredicted RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 LINC01547P58512 204 aaPredicted RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 Q6ZS49 121 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 MOB1BQ7L9L4 216 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 OR5C1Q8NGR4 320 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 MRGPRDQ8TDS7 321 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TRAPPC2LQ9UL33 140 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TEP1Q99973 2627 aaKnown RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 CUBNO60494 3623 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 TLN2Q9Y4G6 2542 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 C3orf85A0A1B0GTC6 90 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 M0QZK8 103 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 NPFFO15130 113 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 SRSF12Q8WXF0 261 aaKnown RBP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF286AQ9HBT8 521 aa5.78□□□□□ -1.48
SCARB2-209ENST00000638409 NIPBLQ6KC79 2804 aaeCLIP5.78□□□□□ -1.48
SCARB2-209ENST00000638409 ZFHX3Q15911 3703 aa5.77□□□□□ -1.48
SCARB2-209ENST00000638409 IGHV2-26A0A0B4J1V2 119 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 GZMBP10144 247 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-209ENST00000638409 TMEM86BQ8N661 226 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 OR10J6PQ8NGY7 276 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 RPUSD4Q96CM3 377 aaKnown RBP5.77□□□□□ -1.49
SCARB2-209ENST00000638409 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 WSB1Q9Y6I7 421 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 SMIM1B2RUZ4 78 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 H3BP45 60 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 PPYP01298 95 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 IGLV1-47P01700 117 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 RIPPLY3P57055 190 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 KLRD1Q13241 179 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 AKR1C8PQ5T2L2 129 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 MINOS1Q5TGZ0 78 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 FAM53AQ6NSI3 398 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-209ENST00000638409 LINC00311Q8N616 119 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 TMEM252Q8N6L7 170 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 FRZBQ92765 325 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 TVP23CQ96ET8 276 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 SLC25A39Q9BZJ4 359 aaPredicted RBP5.77□□□□□ -1.49
SCARB2-209ENST00000638409 ENY2Q9NPA8 101 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 MINOS1-NBL1R4GNA1 71 aa5.77□□□□□ -1.49
SCARB2-209ENST00000638409 HBZP02008 142 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 TMEM267Q0VDI3 215 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-209ENST00000638409 ZNF506Q5JVG8 444 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 RUSC1-AS1Q66K80 236 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 BRD3OSQ6XYD6 125 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 ZNF695Q8IW36 515 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 OR1N2Q8NGR9 330 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 RNF185Q96GF1 192 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 TMEM222Q9H0R3 208 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 LYRM2Q9NU23 88 aaPredicted RBP5.76□□□□□ -1.49
SCARB2-209ENST00000638409 GNG13Q9P2W3 67 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 JPT1Q9UK76 154 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 A0A087WWC5 75 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 TRAV39A0A0B4J263 110 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 LY6LH3BQJ8 138 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 YPEL1O60688 119 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 S100A7P31151 101 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 IZUMO4Q1ZYL8 232 aa5.76□□□□□ -1.49
SCARB2-209ENST00000638409 GALMQ96C23 342 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms