RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 PNRC1Q12796 327 aaPredicted RBP8.89□□□□□ -0.99
CLN6-223ENST00000637823 PSG3Q16557 428 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 KRTAP24-1Q3LI83 254 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 LCN12Q6JVE5 192 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
CLN6-223ENST00000637823 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 RPH3ALQ9UNE2 315 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
CLN6-223ENST00000637823 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 B4DEV8 164 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 M0R3E3 92 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 DNASE2O00115 360 aaPredicted RBP8.88□□□□□ -0.99
CLN6-223ENST00000637823 SOCS3O14543 225 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 UBE2G1P62253 170 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 PAFAH1B2P68402 229 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 TMEM183BQ1AE95 376 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 MS4A6AQ9H2W1 248 aa8.88□□□□□ -0.99
CLN6-223ENST00000637823 TRAV34A0A0B4J273 112 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
CLN6-223ENST00000637823 M0R036 132 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 HLA-DMBP28068 263 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 GNG4P50150 75 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 DEFB114Q30KQ6 69 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 GBGT1Q8N5D6 347 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 RNF182Q8N6D2 247 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 TMEM75Q8N9X5 138 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 DYNLRB2Q8TF09 96 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 DCANP1Q8TF63 244 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 ATRQ13535 2644 aa8.87□□□□□ -0.99
CLN6-223ENST00000637823 TENM1Q9UKZ4 2725 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 TRBV20OR9-2A0A075B6H5 130 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 IGKV3-7A0A075B6H7 116 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 TRAV25A0A0B4J276 109 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
CLN6-223ENST00000637823 K7EQG2 157 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 PF4P02776 101 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
CLN6-223ENST00000637823 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 RBPMS2Q6ZRY4 209 aaKnown RBP8.86□□□□□ -0.99
CLN6-223ENST00000637823 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 SELENOKQ9Y6D0 94 aa8.86□□□□□ -0.99
CLN6-223ENST00000637823 C7orf77A4D0Y5 90 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 TSPAN4O14817 238 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 IGLV2-11P01706 119 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 FLI1Q01543 452 aaPredicted RBP8.85□□□□□ -0.99
CLN6-223ENST00000637823 RHEBQ15382 184 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 ADIRFQ15847 76 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 WFDC3Q8IUB2 231 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 ZNF738Q8NE65 137 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 TMEM158Q8WZ71 300 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 ZNF747Q9BV97 191 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 PSG8Q9UQ74 426 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 SORL1Q92673 2214 aa8.85□□□□□ -0.99
CLN6-223ENST00000637823 A0A087WWC5 75 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 LTAP01374 205 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
CLN6-223ENST00000637823 PRNTQ86SH4 94 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 LINC00482Q8N8I6 264 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 SGK494Q96LW2 274 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
CLN6-223ENST00000637823 IGKV2-40A0A087WW87 121 aaPredicted RBP8.83□□□□□ -1
CLN6-223ENST00000637823 TRAV8-1A0A0A6YYK1 113 aa8.83□□□□□ -1
CLN6-223ENST00000637823 PRAC2D3DTV9 90 aa8.83□□□□□ -1
CLN6-223ENST00000637823 SAP30O75446 220 aa8.83□□□□□ -1
CLN6-223ENST00000637823 GCGP01275 180 aa8.83□□□□□ -1
CLN6-223ENST00000637823 IGKV2D-40P01614 121 aaPredicted RBP8.83□□□□□ -1
CLN6-223ENST00000637823 MT-ND4LP03901 98 aa8.83□□□□□ -1
CLN6-223ENST00000637823 TFPI2P48307 235 aa8.83□□□□□ -1
CLN6-223ENST00000637823 CD300EQ496F6 205 aaPredicted RBP8.83□□□□□ -1
CLN6-223ENST00000637823 C9orf47Q6ZRZ4 202 aa8.83□□□□□ -1
CLN6-223ENST00000637823 Q86TA4 180 aa8.83□□□□□ -1
CLN6-223ENST00000637823 TMEM61Q8N0U2 210 aa8.83□□□□□ -1
CLN6-223ENST00000637823 C3orf56Q8N813 242 aa8.83□□□□□ -1
CLN6-223ENST00000637823 OR2K2Q8NGT1 345 aa8.83□□□□□ -1
CLN6-223ENST00000637823 ISOC2Q96AB3 205 aa8.83□□□□□ -1
CLN6-223ENST00000637823 VGLL1Q99990 258 aa8.83□□□□□ -1
CLN6-223ENST00000637823 MLST8Q9BVC4 326 aa8.83□□□□□ -1
CLN6-223ENST00000637823 BIN3Q9NQY0 253 aa8.83□□□□□ -1
CLN6-223ENST00000637823 AURKAIP1Q9NWT8 199 aaPredicted RBP8.83□□□□□ -1
CLN6-223ENST00000637823 K7EN84 100 aa8.82□□□□□ -1
CLN6-223ENST00000637823 ERCC8Q13216 396 aa8.82□□□□□ -1
CLN6-223ENST00000637823 SAPCD1Q5SSQ6 148 aa8.82□□□□□ -1
CLN6-223ENST00000637823 TMEM78Q5T7P6 136 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms