RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 EXOC3-AS1Q8N2X6 119 aa16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 SFT2D1Q8WV19 159 aa16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 Q9H3A6 140 aa16.51■□□□□ 0.23
CHRNA7-231ENST00000637786 TRAV1-1A0A0B4J248 108 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 KIR2DL5BA0A0G2JN68 375 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 KIR2DL5BA0A0G2JPC4 375 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 FGF8P55075 233 aaPredicted RBP16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 ICAM4Q14773 271 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 ALKAL2Q6UX46 152 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 KIR2DL5AQ8N109 375 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 KIR2DL5BQ8NHK3 375 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 OTORQ9NRC9 128 aa16.5■□□□□ 0.23
CHRNA7-231ENST00000637786 DEFB1P60022 68 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 FAM74A1Q5RGS3 127 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 GDF5OSQ5U4N7 250 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 IQCF2Q8IXL9 164 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 ARL6IP6Q8N6S5 226 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 OR8A1Q8NGG7 326 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 B9D2Q9BPU9 175 aa16.49■□□□□ 0.23
CHRNA7-231ENST00000637786 A0A1W2PRE2 83 aa16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 A8MTW9 85 aa16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 ZNF705FA8MVS1 300 aaPredicted RBP16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 F6UB75 175 aa16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 M0R3E3 92 aa16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 DUSP14O95147 198 aaKnown RBP16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 APOC4P55056 127 aa16.48■□□□□ 0.23
CHRNA7-231ENST00000637786 PRKDCP78527 4128 aaKnown RBP16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 TEX46H3BTG2 121 aa16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 RPL35AP18077 110 aaKnown RBP16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 MORN3Q6PF18 240 aaPredicted RBP16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 RXFP4Q8TDU9 374 aa16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 TMPRSS5Q9H3S3 457 aa16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 ARL2-SNX15V9GYD0 113 aa16.47■□□□□ 0.23
CHRNA7-231ENST00000637786 HBE1P02100 147 aa16.46■□□□□ 0.23
CHRNA7-231ENST00000637786 CSN1S1P47710 185 aa16.46■□□□□ 0.23
CHRNA7-231ENST00000637786 NKX6-2Q9C056 277 aaPredicted RBP16.46■□□□□ 0.23
CHRNA7-231ENST00000637786 PGPA6NDG6 321 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 ZNF705EA8MWA4 302 aaPredicted RBP16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 PRAC2D3DTV9 90 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 UBE2CO00762 179 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 PPT1P50897 306 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 CNN1P51911 297 aaKnown RBP16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 HAGHQ16775 308 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 OR10J6PQ8NGY7 276 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 CSTL1Q9H114 145 aa16.45■□□□□ 0.22
CHRNA7-231ENST00000637786 NUTF2P61970 127 aaKnown RBP16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 BLOC1S1P78537 153 aa16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 HIST1H1AQ02539 215 aaPredicted RBP16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 TEX261Q6UWH6 196 aa16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 OR4B1Q8NGF8 309 aa16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 CMTM2Q8TAZ6 248 aa16.44■□□□□ 0.22
CHRNA7-231ENST00000637786 SBSPONQ8IVN8 264 aa16.43■□□□□ 0.22
CHRNA7-231ENST00000637786 C5orf17Q8NAS9 161 aa16.43■□□□□ 0.22
CHRNA7-231ENST00000637786 RBAKDNA6NC62 111 aa16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 FAM74A7A6NL05 159 aa16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 GGTLC3B5MD39 225 aa16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 NPIPB6E9PJ23 425 aa16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 ZNF705DP0CH99 300 aaPredicted RBP16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 ZNF705BP0CI00 300 aaPredicted RBP16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 YTHDF2Q9Y5A9 579 aaKnown RBP16.42■□□□□ 0.22
CHRNA7-231ENST00000637786 DIRC3C9JPN6 131 aa16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 SLC25A5P05141 298 aaKnown RBP16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 UBE2G2P60604 165 aa16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 SUMO1P63165 101 aaKnown RBP16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 PMS2P11Q13670 270 aa16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 AMTNQ6UX39 209 aa16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 Q6ZWC4 215 aa16.41■□□□□ 0.22
CHRNA7-231ENST00000637786 A0A1B0GV50 99 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 SERTM2A0A1B0GWG4 89 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 IFNA7P01567 189 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 IGKV3-20P01619 116 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 C9orf47Q6ZRZ4 202 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 ZNF680Q8NEM1 530 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 LINC00477Q96M19 166 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 ODF3Q96PU9 254 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 TM2D3Q9BRN9 247 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 C1QTNF4Q9BXJ3 329 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 MANBALQ9NQG1 85 aa16.4■□□□□ 0.22
CHRNA7-231ENST00000637786 CA1P00915 261 aaPredicted RBP16.39■□□□□ 0.21
CHRNA7-231ENST00000637786 GIG44P09565 113 aaPredicted RBP16.39■□□□□ 0.21
CHRNA7-231ENST00000637786 NHLRC4P0CG21 123 aaPredicted RBP16.39■□□□□ 0.21
CHRNA7-231ENST00000637786 LYPD6BQ8NI32 183 aa16.39■□□□□ 0.21
CHRNA7-231ENST00000637786 TCEAL7Q9BRU2 100 aa16.39■□□□□ 0.21
CHRNA7-231ENST00000637786 IGKV2-40A0A087WW87 121 aaPredicted RBP16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 IGKV2D-40P01614 121 aaPredicted RBP16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 AMBPP02760 352 aa16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 PRB4P10163 310 aaPredicted RBP16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 CCL20P78556 96 aa16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 ASCL2Q99929 193 aa16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 EPDR1Q9UM22 224 aa16.38■□□□□ 0.21
CHRNA7-231ENST00000637786 PAGE4O60829 102 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 TCRAP04437 139 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 TMEM78Q5T7P6 136 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 CCDC28AQ8IWP9 274 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 SPATA25Q9BR10 227 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 AGPAT4-IT1Q9H0P7 198 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 SLC35B3Q9H1N7 401 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 PPP1R14DQ9NXH3 145 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 TP53TG1Q9Y2A0 90 aa16.37■□□□□ 0.21
CHRNA7-231ENST00000637786 CST9LP1Q5W188 147 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms