RNA–Protein interactions for RNA: ENST00000637637.1

C11orf53-203, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 1 (best) BASIC

Gene C11orf53, Length 1,049 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-203ENST00000637637 STAG3L2P0CL84 134 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 STAG3L3P0CL85 134 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
C11orf53-203ENST00000637637 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 GDF5OSQ5U4N7 250 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 STOML3Q8TAV4 291 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
C11orf53-203ENST00000637637 F6UB75 175 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 NDUFB4O95168 129 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 HLA-DMBP28068 263 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
C11orf53-203ENST00000637637 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
C11orf53-203ENST00000637637 SLC51BQ86UW2 128 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
C11orf53-203ENST00000637637 HMGB3O15347 200 aaKnown RBP11.58□□□□□ -0.56
C11orf53-203ENST00000637637 ARL14EPLP0DKL9 152 aa11.58□□□□□ -0.56
C11orf53-203ENST00000637637 ICAM4Q14773 271 aa11.58□□□□□ -0.56
C11orf53-203ENST00000637637 DPPA3Q6W0C5 159 aa11.58□□□□□ -0.56
C11orf53-203ENST00000637637 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
C11orf53-203ENST00000637637 ZNF503Q96F45 646 aa11.58□□□□□ -0.56
C11orf53-203ENST00000637637 PRKDCP78527 4128 aaKnown RBP11.58□□□□□ -0.56
C11orf53-203ENST00000637637 A8MTW9 85 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
C11orf53-203ENST00000637637 TSPOP30536 169 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 RAB5CP51148 216 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 DEFB1P60022 68 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 IQCF2Q8IXL9 164 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 EXOC3-AS1Q8N2X6 119 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 RARRES2Q99969 163 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 Q9H3A6 140 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 OTORQ9NRC9 128 aa11.57□□□□□ -0.56
C11orf53-203ENST00000637637 GCHFRP30047 84 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 LINC00477Q96M19 166 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 RETNQ9HD89 108 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 XCL2Q9UBD3 114 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 GOLT1BQ9Y3E0 138 aa11.56□□□□□ -0.56
C11orf53-203ENST00000637637 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
C11orf53-203ENST00000637637 ZNF705DP0CH99 300 aaPredicted RBP11.55□□□□□ -0.56
C11orf53-203ENST00000637637 ZNF705BP0CI00 300 aaPredicted RBP11.55□□□□□ -0.56
C11orf53-203ENST00000637637 OR11H2Q8NH07 326 aa11.55□□□□□ -0.56
C11orf53-203ENST00000637637 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
C11orf53-203ENST00000637637 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
C11orf53-203ENST00000637637 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 PGPA6NDG6 321 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 TEX46H3BTG2 121 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 M0R3E3 92 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 EIF3GO75821 320 aaKnown RBP eCLIP11.54□□□□□ -0.56
C11orf53-203ENST00000637637 GIG44P09565 113 aaPredicted RBP11.54□□□□□ -0.56
C11orf53-203ENST00000637637 LEPP41159 167 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 C9orf62Q8N4C0 152 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 FAM213BQ8TBF2 198 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 SUN5Q8TC36 379 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 ODF3Q96PU9 254 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
C11orf53-203ENST00000637637 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 INSP01308 110 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 SLC25A5P05141 298 aaKnown RBP11.53□□□□□ -0.56
C11orf53-203ENST00000637637 CDKN1BP46527 198 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 FXYD7P58549 80 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 CD300CQ08708 224 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 AMTNQ6UX39 209 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 IGF2BP2-AS1Q96M15 143 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
C11orf53-203ENST00000637637 SERTM2A0A1B0GWG4 89 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 K7EQM0 130 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 H2AFB1P0C5Y9 115 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 MIFP14174 115 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 CSNK1G2-AS1Q8NCQ2 148 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
C11orf53-203ENST00000637637 PPT1P50897 306 aa11.51□□□□□ -0.57
C11orf53-203ENST00000637637 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
C11orf53-203ENST00000637637 C9orf47Q6ZRZ4 202 aa11.51□□□□□ -0.57
C11orf53-203ENST00000637637 C5orf17Q8NAS9 161 aa11.51□□□□□ -0.57
C11orf53-203ENST00000637637 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
C11orf53-203ENST00000637637 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
C11orf53-203ENST00000637637 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 NMBP08949 121 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 SSX7Q7RTT5 188 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 TMEM256Q8N2U0 113 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 NEU1Q99519 415 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 AGRNO00468 2067 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 DNAH9Q9NYC9 4486 aa11.5□□□□□ -0.57
C11orf53-203ENST00000637637 IGHV3OR16-12A0A075B7B8 117 aa11.49□□□□□ -0.57
C11orf53-203ENST00000637637 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
C11orf53-203ENST00000637637 M0R2Z0 102 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms