RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FGF23Q9GZV9 251 aaPredicted RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 SDF2L1Q9HCN8 221 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 PRO0461Q9UI25 63 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 MYH6P13533 1939 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 C10orf71Q711Q0 1435 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 MAP2P11137 1827 aaKnown RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 SCN1AP35498 2009 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 TARBP1Q13395 1621 aaKnown RBP2.13□□□□□ -2.07
VIM-210ENST00000637053 TRPM1Q7Z4N2 1603 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 IQGAP3Q86VI3 1631 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 DISP1Q96F81 1524 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 SYCP2Q9BX26 1530 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 IGHV3-72A0A0B4J1Y9 119 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 LY6G6EA0A0G2JKS1 128 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 NAP1L6A6NFF2 107 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 A6NN06 94 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 NUPR1O60356 82 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 IGLV2-23P01705 113 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 HIST1H4AP62805 103 aaKnown RBP2.13□□□□□ -2.07
VIM-210ENST00000637053 CCL8P80075 99 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 CIRBPQ14011 172 aaKnown RBP2.13□□□□□ -2.07
VIM-210ENST00000637053 INSL4Q14641 139 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 FAM72AQ5TYM5 149 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 C12orf73Q69YU5 71 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 CGB2Q6NT52 195 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 LYPD2Q6UXB3 125 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 ATP11AUNQ6ZP68 121 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 Q6ZQT7 251 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 HMGN2P46Q86SG4 172 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 CEND1Q8N111 149 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 ORMDL3Q8N138 153 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 Q8N7P7 452 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 NPBQ8NG41 125 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 SPTSSAQ969W0 71 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 SMIM14Q96QK8 99 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 MGST2Q99735 147 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 UPK3BQ9BT76 320 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 SMDT1Q9H4I9 107 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 CYTL1Q9NRR1 136 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 TAS2R4Q9NYW5 299 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 DHRS4-AS1Q9P1J3 65 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 LY96Q9Y6Y9 160 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 ABCA8O94911 1581 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 MYO5CQ9NQX4 1742 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 KIF26AQ9ULI4 1882 aaPredicted RBP2.13□□□□□ -2.07
VIM-210ENST00000637053 LRRC9Q6ZRR7 1453 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 PXDNQ92626 1479 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 LAMB4A4D0S4 1761 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 STRCQ7RTU9 1775 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 MYO10Q9HD67 2058 aa2.13□□□□□ -2.07
VIM-210ENST00000637053 CROCC2H7BZ55 1655 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 CCDC88CQ9P219 2028 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 DIP2AQ14689 1571 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 CEP170Q5SW79 1584 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 DIP2CQ9Y2E4 1556 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IGLV8-61A0A075B6I0 122 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IGLV3-9A0A075B6K5 115 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IGHV1OR15-9A0A0B4J2B8 117 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IGHV3-35A0A0C4DH35 117 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 MDFIC2A0A1B0GVS7 189 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 SMIM1B2RUZ4 78 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 UMAD1C9J7I0 102 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 C3orf84H3BNL1 204 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 SOCS2O14508 198 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 CRIP2P52943 208 aaPredicted RBP2.12□□□□□ -2.07
VIM-210ENST00000637053 ZNF345Q14585 488 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IGFBP7Q16270 282 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 C2orf66Q6UXQ4 117 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 MIR17HGQ75NE6 70 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 SIGLECL1Q8N7X8 197 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 Q8N976 141 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 OR8B3Q8NGG8 313 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 C7orf33Q8WU49 177 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 CAMK2N2Q96S95 79 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 NABP2Q9BQ15 211 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 PLA2G12AQ9BZM1 189 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 ZNF581Q9P0T4 197 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 MYO18AQ92614 2054 aaKnown RBP2.12□□□□□ -2.07
VIM-210ENST00000637053 A0A1B0GUL6 1792 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 PPLO60437 1756 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 THSD7BQ9C0I4 1608 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 IQSEC2Q5JU85 1478 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 KIAA1671Q9BY89 1806 aa2.12□□□□□ -2.07
VIM-210ENST00000637053 PPRC1Q5VV67 1664 aaKnown RBP2.12□□□□□ -2.07
VIM-210ENST00000637053 ANK1P16157 1881 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 MON2Q7Z3U7 1717 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 PLXNC1O60486 1568 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 MED1Q15648 1581 aaPredicted RBP2.11□□□□□ -2.07
VIM-210ENST00000637053 ABCA6Q8N139 1617 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 IGHV3-43A0A0B4J1X8 118 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 TRAV2A0A0B4J234 112 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 TRAV17A0A0B4J275 112 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 IGKV3D-20A0A0C4DH25 116 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 A0A0J9YXY3 114 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 KANTRA0A1W2PQU2 76 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 IBA57-AS1B1ANH7 110 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 PRAC2D3DTV9 90 aa2.11□□□□□ -2.07
VIM-210ENST00000637053 E7EQL1 145 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms