RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 MRPL32Q9BYC8 188 aaKnown RBP6.26□□□□□ -1.41
CDKL5-209ENST00000635828 MAP1LC3BQ9GZQ8 125 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 Q9H3A6 140 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 ACTR3CQ9C0K3 210 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-209ENST00000635828 TUBA4BQ9H853 241 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 TMEM14CQ9P0S9 112 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 ATP5G3P48201 142 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 CNN1P51911 297 aaKnown RBP6.25□□□□□ -1.41
CDKL5-209ENST00000635828 IFITM2Q01629 132 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 KHDC3LQ587J8 217 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 LINC00322Q6ZN03 302 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-209ENST00000635828 H3BMM0 161 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 ISLRO14498 428 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 HAGHQ16775 308 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 RPUSD4Q96CM3 377 aaKnown RBP6.25□□□□□ -1.41
CDKL5-209ENST00000635828 KCNIP2Q9NS61 270 aa6.25□□□□□ -1.41
CDKL5-209ENST00000635828 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 PGPA6NDG6 321 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 ZNF705EA8MWA4 302 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 BMI1P35226 326 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 SULT1A2P50226 295 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 SNRPD3P62318 126 aaKnown RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 HIST1H1AQ02539 215 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 PSG3Q16557 428 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 RBMY1A1P0DJD3 496 aaKnown RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 RBMY1CP0DJD4 496 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 SUMO1P63165 101 aaKnown RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 RBMY1FQ15415 496 aaKnown RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 SAV1Q9H4B6 383 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-209ENST00000635828 XCL2Q9UBD3 114 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 A0A0J9YX75 114 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 PSMB3P49720 205 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
CDKL5-209ENST00000635828 TRAV34A0A0B4J273 112 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 DEFB4AO15263 64 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 H2AFB1P0C5Y9 115 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
CDKL5-209ENST00000635828 GPR82Q96P67 336 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 RARRES2Q99969 163 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 PFDN2Q9UHV9 154 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 PLECQ15149 4684 aaKnown RBP6.23□□□□□ -1.41
CDKL5-209ENST00000635828 PAGE4O60829 102 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 CXorf1O96002 111 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 MBP02144 154 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 PRR9Q5T870 116 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 STHQ8IWL8 128 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 ZNF680Q8NEM1 530 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 FAM74A7A6NL05 159 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 CT45A10P0DMU9 189 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 AMTNQ6UX39 209 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 PQLC2Q6ZP29 291 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 TVP23CQ96ET8 276 aa6.23□□□□□ -1.41
CDKL5-209ENST00000635828 HLA-DRB4P13762 266 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 TAS2R45P59539 299 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 GNG13Q9P2W3 67 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 HLA-DRB4X5D2U9 266 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 SRSF3P84103 164 aaKnown RBP6.22□□□□□ -1.41
CDKL5-209ENST00000635828 SUN5Q8TC36 379 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 IGHV3OR16-12A0A075B7B8 117 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 CRXO43186 299 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-209ENST00000635828 CA1P00915 261 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-209ENST00000635828 CD5P06127 495 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 GOLT1AQ6ZVE7 132 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 MBD3L1Q8WWY6 194 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 DERL1Q9BUN8 251 aa6.22□□□□□ -1.41
CDKL5-209ENST00000635828 LOC102724200A0A096LPH7 203 aaPredicted RBP6.21□□□□□ -1.41
CDKL5-209ENST00000635828 TRAV2A0A0B4J234 112 aa6.21□□□□□ -1.41
CDKL5-209ENST00000635828 ID1P41134 155 aa6.21□□□□□ -1.41
CDKL5-209ENST00000635828 CST9LP1Q5W188 147 aa6.21□□□□□ -1.41
CDKL5-209ENST00000635828 UMAD1C9J7I0 102 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 DIRC3C9JPN6 131 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 MEOX2P50222 304 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 FOXI2Q6ZQN5 318 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 CSNK1G2-AS1Q8NCQ2 148 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
CDKL5-209ENST00000635828 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 IGLV2-11P01706 119 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 SLC25A5P05141 298 aaKnown RBP6.2□□□□□ -1.42
CDKL5-209ENST00000635828 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 F6UZH7 168 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 HTN1P15515 57 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 PDE6HQ13956 83 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 CCDC28AQ8IWP9 274 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 C8orf49Q96NF6 230 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 KMT2CQ8NEZ4 4911 aaKnown RBP6.2□□□□□ -1.42
CDKL5-209ENST00000635828 EIF5AP63241 154 aaKnown RBP6.2□□□□□ -1.42
CDKL5-209ENST00000635828 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 GUK1Q16774 197 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 CSTL1Q9H114 145 aa6.2□□□□□ -1.42
CDKL5-209ENST00000635828 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 EBLN2Q6P2I7 272 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 S100A7AQ86SG5 101 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 OVOL2Q9BRP0 275 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms