RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZNF705DP0CH99 300 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 ZNF705BP0CI00 300 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 CDC34P49427 236 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 RPP25LQ8N5L8 163 aaKnown RBP10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 MUC7Q8TAX7 377 aa10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
CDC42BPB-209ENST00000634889 MIFP14174 115 aa10.72□□□□□ -0.69
CDC42BPB-209ENST00000634889 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
CDC42BPB-209ENST00000634889 IL17DQ8TAD2 202 aa10.72□□□□□ -0.69
CDC42BPB-209ENST00000634889 C11orf68Q9H3H3 251 aaKnown RBP10.72□□□□□ -0.69
CDC42BPB-209ENST00000634889 A0A0J9YWU9 116 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 KANTRA0A1W2PQU2 76 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 BOLA2-SMG1P6H3BVE0 249 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 BCL2L11O43521 198 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 FXYD7P58549 80 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 RAB24Q969Q5 203 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 PHYHIPLQ96FC7 376 aa10.71□□□□□ -0.69
CDC42BPB-209ENST00000634889 hCG_2014768A0A024R1R8 64 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 M0R3E3 92 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 STAG3L2P0CL84 134 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 ICAM4Q14773 271 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 AKAP14Q86UN6 197 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 Q8NAQ8 132 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 IGF2BP2-AS1Q96M15 143 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 NEU1Q99519 415 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 X6R8D5 127 aa10.7□□□□□ -0.7
CDC42BPB-209ENST00000634889 SMIM9A6NGZ8 99 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 M0R2Z0 102 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 C1QBP02746 253 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 ARL14EPLP0DKL9 152 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 EIF5AP63241 154 aaKnown RBP10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 SPINK13Q1W4C9 94 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 AKR1C8PQ5T2L2 129 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 Q9H3A6 140 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
CDC42BPB-209ENST00000634889 HMGB3O15347 200 aaKnown RBP10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 PFDN1O60925 122 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 CXorf1O96002 111 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 INSP01308 110 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 TSPOP30536 169 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 CDKN1BP46527 198 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 RANP62826 216 aaKnown RBP10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 TMUB2Q71RG4 321 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 HYLS1Q96M11 299 aa10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 ZNF471Q9BX82 626 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPB-209ENST00000634889 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 SEC11BP0C7V7 166 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 CSN1S1P47710 185 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 C1orf158Q8N1D5 194 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 SUN5Q8TC36 379 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
CDC42BPB-209ENST00000634889 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 RBAKDNA6NC62 111 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 GCHFRP30047 84 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 BAP18Q8IXM2 172 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 TMEM256Q8N2U0 113 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 STOML3Q8TAV4 291 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 RXFP4Q8TDU9 374 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 TMEM167BQ9NRX6 74 aa10.66□□□□□ -0.7
CDC42BPB-209ENST00000634889 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 TMEM189A5PLL7 270 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 UMAD1C9J7I0 102 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 RBMY1A1P0DJD3 496 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 RBMY1CP0DJD4 496 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 TPT1P13693 172 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 LEPP41159 167 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 ZNF726P1Q15940 193 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 CASC10Q5T4H9 136 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 SSX7Q7RTT5 188 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 C20orf144Q9BQM9 153 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.7
CDC42BPB-209ENST00000634889 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 PGPA6NDG6 321 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 DEFB4AO15263 64 aa10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPB-209ENST00000634889 HBE1P02100 147 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms