RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 NEU1Q99519 415 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 SLC50A1Q9BRV3 221 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 SLC35B3Q9H1N7 401 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 C11orf1Q9H5F2 150 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 SLC39A9Q9NUM3 307 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 WDR83OSQ9Y284 106 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 RFNGQ9Y644 331 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 NBEAL2Q6ZNJ1 2754 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 TRAV8-2A0A0B4J237 113 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 TRAV10A0A0B4J240 114 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 TEX48A0A1B0GUV7 120 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 IGLL5B9A064 214 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 C17orf112F2Z3M2 114 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 INSP01308 110 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 SPART-AS1P0CW21 52 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 CXCL3P19876 107 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 CNN1P51911 297 aaKnown RBP4.61□□□□□ -1.67
TCF4-249ENST00000625716 TCTAP57738 103 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 NHLH2Q02577 135 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 OPCMLQ14982 345 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 GUK1Q16774 197 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 RRN3P1Q2M238 152 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 ZNF705AQ6ZN79 300 aaPredicted RBP4.61□□□□□ -1.67
TCF4-249ENST00000625716 OR11H7Q8NGC8 314 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 OR10J6PQ8NGY7 276 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 TMEM37Q8WXS4 190 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 LINC00476Q8WZB0 136 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 RPUSD4Q96CM3 377 aaKnown RBP4.61□□□□□ -1.67
TCF4-249ENST00000625716 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 MLST8Q9BVC4 326 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 KCNIP2Q9NS61 270 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 PXMP4Q9Y6I8 212 aa4.61□□□□□ -1.67
TCF4-249ENST00000625716 TRAV5A0A0B4J249 113 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 LOC102723971A0A1B0GUV8 181 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 ZNF705FA8MVS1 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-249ENST00000625716 M0R2Z0 102 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 PTTG1O95997 202 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 IFNA5P01569 189 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 SNRPCP09234 159 aaKnown RBP4.6□□□□□ -1.67
TCF4-249ENST00000625716 ZNF705DP0CH99 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-249ENST00000625716 ZNF705BP0CI00 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-249ENST00000625716 H2BFSP57053 126 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 CLINT1Q14677 625 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 SPINK13Q1W4C9 94 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 Q6ZTC4 211 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 OR8A1Q8NGG7 326 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 THAP6Q8TBB0 222 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 SCGB1C1Q8TD33 95 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 CHAC2Q8WUX2 184 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 PPP1R1CQ8WVI7 109 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 NPCDR1Q9BY65 106 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 OR5AC2Q9NZP5 309 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 TIMM9Q9Y5J7 89 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 TNFRSF18Q9Y5U5 241 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 DNAH7Q8WXX0 4024 aa4.6□□□□□ -1.67
TCF4-249ENST00000625716 DEFB131BA0A096LNP1 70 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 H3BTX0 84 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 BOLA2-SMG1P6H3BVE0 249 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 MRPS12O15235 138 aaKnown RBP4.59□□□□□ -1.67
TCF4-249ENST00000625716 MPC2O95563 127 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 HTN1P15515 57 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 RPL12P30050 165 aaKnown RBP4.59□□□□□ -1.67
TCF4-249ENST00000625716 TSPOP30536 169 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 LGALS9CQ6DKI2 356 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 AMTNQ6UX39 209 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 ZNF767PQ75MW2 155 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 C1orf158Q8N1D5 194 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 TMEM256Q8N2U0 113 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 LINC01587Q99440 93 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 ATP5SQ99766 215 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 AAMDCQ9H7C9 122 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 ZNF331Q9NQX6 463 aaPredicted RBP4.59□□□□□ -1.67
TCF4-249ENST00000625716 CELA1Q9UNI1 258 aa4.59□□□□□ -1.67
TCF4-249ENST00000625716 IGHV4-4A0A075B6R2 117 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 TRAV12-2A0A075B6T6 113 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 A8MTW9 85 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 ZNF705GA8MUZ8 300 aaPredicted RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 H0YIZ8 118 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 H3BQ15 152 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 SLC17A3O00476 420 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 ZNF253O75346 499 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 IGLC2P0DOY2 106 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 PRB4P10163 310 aaPredicted RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 HIST1H1EP10412 219 aaKnown RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 LEPP41159 167 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 CDKN1BP46527 198 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 DAD1P61803 113 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 RGS21Q2M5E4 152 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 C12orf74Q32Q52 190 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 FAM222AQ5U5X8 452 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 MORN5Q5VZ52 161 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 CCDC28AQ8IWP9 274 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 BAP18Q8IXM2 172 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 BLNKQ8WV28 456 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 SAT2Q96F10 170 aaPredicted RBP4.58□□□□□ -1.68
TCF4-249ENST00000625716 NIPSNAP3BQ9BS92 247 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 NDUFAF3Q9BU61 184 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 RNF126Q9BV68 326 aa4.58□□□□□ -1.68
TCF4-249ENST00000625716 MRPL32Q9BYC8 188 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms