RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 C5orf17Q8NAS9 161 aa6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ZNF331Q9NQX6 463 aaPredicted RBP6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PRELID1Q9Y255 219 aa6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 YTHDF2Q9Y5A9 579 aaKnown RBP6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SMAD5-AS1Q9Y6J3 95 aa6.46□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ATRQ13535 2644 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ISLRO14498 428 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 NDUFS6O75380 124 aaKnown RBP6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 EDN2P20800 178 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ATP5G3P48201 142 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CEBPGP53567 150 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ICAM4Q14773 271 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 C9orf66Q5T8R8 295 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 FAM90A2PQ658T7 463 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 LCN12Q6JVE5 192 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GBGT1Q8N5D6 347 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 OR2K2Q8NGT1 345 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 RPUSD4Q96CM3 377 aaKnown RBP6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SLC35B3Q9H1N7 401 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 MS4A6AQ9H2W1 248 aa6.45□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TRAV2A0A0B4J234 112 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 OR4C46A6NHA9 309 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TMEM250H0YL14 139 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SLC17A3O00476 420 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TSPAN4O14817 238 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 NDUFB4O95168 129 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TFPI2P48307 235 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GUCA2BQ16661 112 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CD300EQ496F6 205 aaPredicted RBP6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 WDR73Q6P4I2 378 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ADAMTSL5Q6ZMM2 481 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 EXOC3-AS1Q8N2X6 119 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 LINC00052Q96N35 136 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SPAG8Q99932 426 aaPredicted RBP6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GPR61Q9BZJ8 451 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 RPH3ALQ9UNE2 315 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SELENOKQ9Y6D0 94 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SERTM2A0A1B0GWG4 89 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GGTLC3B5MD39 225 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CNN1P51911 297 aaKnown RBP6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CD81P60033 236 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 UBE2G1P62253 170 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SOHLH1Q5JUK2 328 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TMEM61Q8N0U2 210 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 MRPL53Q96EL3 112 aaKnown RBP6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ATG101Q9BSB4 218 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 EPDR1Q9UM22 224 aa6.44□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PEX7O00628 323 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 IGLV1-51P01701 117 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 S100A9P06702 114 aaKnown RBP6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SRP19P09132 144 aaKnown RBP6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SFTA3P0C7M3 94 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 AKR1C3P42330 323 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CMC4P56277 68 aaPredicted RBP6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PSG3Q16557 428 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 CYB561D1Q8N8Q1 229 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ZNF738Q8NE65 137 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 DCANP1Q8TF63 244 aa6.43□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SCO2A0A1W2PP80 73 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 FBLL1A6NHQ2 334 aaKnown RBP6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 F8W036 122 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 K7EQG2 157 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TCRAP04437 139 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 FAM74A3Q4VXF1 159 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 IGFL4Q6B9Z1 124 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 RNF182Q8N6D2 247 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 WFDC9Q8NEX5 89 aa6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TRAV8-2A0A0B4J237 113 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TMEM218A2RU14 115 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ZNF727A8MUV8 499 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 M0R3E3 92 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SOCS3O14543 225 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ZNF688P0C7X2 276 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GNG5P63218 68 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PRR31Q5SQ13 230 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 EBLN2Q6P2I7 272 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PET117Q6UWS5 81 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 GOLT1AQ6ZVE7 132 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 OR10J6PQ8NGY7 276 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 C11orf52Q96A22 123 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 FMC1Q96HJ9 113 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 MDFIQ99750 246 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 SMIM7Q9BQ49 75 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 PARLQ9H300 379 aa6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 ZMAT5Q9UDW3 170 aaKnown RBP6.41□□□□□ -1.38
SOX9-AS1-217ENST00000623935 RBAKDNA6NC62 111 aa6.4□□□□□ -1.38
SOX9-AS1-217ENST00000623935 HLA-DMBP28068 263 aa6.4□□□□□ -1.38
SOX9-AS1-217ENST00000623935 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.38
SOX9-AS1-217ENST00000623935 TMEM78Q5T7P6 136 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms