RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 MPDU1O75352 247 aa14.91□□□□□ -0.02
PCDHB4-202ENST00000623478 PPP1R1CQ8WVI7 109 aa14.91□□□□□ -0.02
PCDHB4-202ENST00000623478 NIPSNAP3BQ9BS92 247 aa14.91□□□□□ -0.02
PCDHB4-202ENST00000623478 ZNF586Q9NXT0 402 aa14.91□□□□□ -0.02
PCDHB4-202ENST00000623478 CYCSP99999 105 aaKnown RBP14.9□□□□□ -0.02
PCDHB4-202ENST00000623478 TEX48A0A1B0GUV7 120 aa14.89□□□□□ -0.03
PCDHB4-202ENST00000623478 GUK1Q16774 197 aa14.89□□□□□ -0.03
PCDHB4-202ENST00000623478 PARD6GQ9BYG4 376 aaPredicted RBP14.89□□□□□ -0.03
PCDHB4-202ENST00000623478 PYYP10082 97 aa14.88□□□□□ -0.03
PCDHB4-202ENST00000623478 HTN3P15516 51 aa14.88□□□□□ -0.03
PCDHB4-202ENST00000623478 AZU1P20160 251 aa14.88□□□□□ -0.03
PCDHB4-202ENST00000623478 KIR3DS1Q14943 382 aa14.88□□□□□ -0.03
PCDHB4-202ENST00000623478 MPC2O95563 127 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 CDKN1BP46527 198 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 OR10J6PQ8NGY7 276 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 LINC01587Q99440 93 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 NDUFAF3Q9BU61 184 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 TMEM14CQ9P0S9 112 aa14.87□□□□□ -0.03
PCDHB4-202ENST00000623478 TRBV19A0A075B6N1 114 aa14.86□□□□□ -0.03
PCDHB4-202ENST00000623478 WDR61Q9GZS3 305 aaKnown RBP14.86□□□□□ -0.03
PCDHB4-202ENST00000623478 DNAH2Q9P225 4427 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 PLAC8L1A1L4L8 177 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 M0R3E3 92 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 ZNF253O75346 499 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 NDUFB4O95168 129 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 HTN1P15515 57 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 TSPOP30536 169 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 DAD1P61803 113 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 OXA1LQ15070 435 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 MIR17HGQ75NE6 70 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 TMEM256Q8N2U0 113 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 SLC25A2Q9BXI2 301 aa14.85□□□□□ -0.03
PCDHB4-202ENST00000623478 HIST1H1EP10412 219 aaKnown RBP14.84□□□□□ -0.03
PCDHB4-202ENST00000623478 GFI1BQ5VTD9 330 aa14.84□□□□□ -0.03
PCDHB4-202ENST00000623478 BLNKQ8WV28 456 aa14.84□□□□□ -0.03
PCDHB4-202ENST00000623478 FAM167A-AS1Q96KT0 104 aa14.84□□□□□ -0.03
PCDHB4-202ENST00000623478 ATP5SQ99766 215 aa14.84□□□□□ -0.03
PCDHB4-202ENST00000623478 NPIPB6E9PJ23 425 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 J3KRW8 73 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 PET100P0DJ07 73 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 CT45A10P0DMU9 189 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 TAS2R60P59551 318 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 FCN2Q15485 313 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 SMIM3Q9BZL3 60 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 MBD2Q9UBB5 411 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 HSPB11Q9Y547 144 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 TIMM9Q9Y5J7 89 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 ALG5Q9Y673 324 aa14.83□□□□□ -0.04
PCDHB4-202ENST00000623478 EXOC3-AS1Q8N2X6 119 aa14.82□□□□□ -0.04
PCDHB4-202ENST00000623478 KCNIP2Q9NS61 270 aa14.82□□□□□ -0.04
PCDHB4-202ENST00000623478 HECTD4Q9Y4D8 3996 aa14.82□□□□□ -0.04
PCDHB4-202ENST00000623478 LYRM9A8MSI8 78 aa14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 DEFB130BP0DP73 79 aa14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 DEFB130AP0DP74 79 aa14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 RPL12P30050 165 aaKnown RBP14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 PDE6HQ13956 83 aa14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 MRPL53Q96EL3 112 aaKnown RBP14.81□□□□□ -0.04
PCDHB4-202ENST00000623478 H7BYZ3 331 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 P0DMU3 169 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 FAM231AP0DMU4 169 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 FAM231CP0DMU5 169 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 ERCC8Q13216 396 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 TMEM88Q6PEY1 159 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 RNASE8Q8TDE3 154 aaKnown RBP14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 C16orf74Q96GX8 76 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 FAM210BQ96KR6 192 aa14.8□□□□□ -0.04
PCDHB4-202ENST00000623478 C17orf112F2Z3M2 114 aa14.79□□□□□ -0.04
PCDHB4-202ENST00000623478 ODF3Q96PU9 254 aa14.79□□□□□ -0.04
PCDHB4-202ENST00000623478 C20orf144Q9BQM9 153 aa14.79□□□□□ -0.04
PCDHB4-202ENST00000623478 MRPL32Q9BYC8 188 aaKnown RBP14.79□□□□□ -0.04
PCDHB4-202ENST00000623478 FUT9Q9Y231 359 aa14.79□□□□□ -0.04
PCDHB4-202ENST00000623478 TRAV12-3A0A0B4J271 114 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 PTTG1O95997 202 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 OR10J4P0C629 311 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 LEPP41159 167 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 ICAM4Q14773 271 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 POM121L12Q8N7R1 296 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 FXYD5Q96DB9 178 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 OR51M1Q9H341 326 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 WFDC1Q9HC57 220 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 PRELID1Q9Y255 219 aa14.78□□□□□ -0.04
PCDHB4-202ENST00000623478 FAT2Q9NYQ8 4349 aa14.77□□□□□ -0.04
PCDHB4-202ENST00000623478 NBEAP1P0C6P0 100 aa14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 FFAR4Q5NUL3 377 aa14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 FAM122CQ6P4D5 195 aa14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 PAXXQ9BUH6 204 aa14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 AAMDCQ9H7C9 122 aa14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 NOP10Q9NPE3 64 aaKnown RBP14.77□□□□□ -0.05
PCDHB4-202ENST00000623478 IGKV2-40A0A087WW87 121 aaPredicted RBP14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 IFNA5P01569 189 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 IGKV2D-40P01614 121 aaPredicted RBP14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 ZNF493Q6ZR52 646 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 SCGB1C1Q8TD33 95 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 RNF141Q8WVD5 230 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 ZNF503Q96F45 646 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 AGPAT4-IT1Q9H0P7 198 aa14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 TIMM8BQ9Y5J9 83 aaPredicted RBP14.76□□□□□ -0.05
PCDHB4-202ENST00000623478 OR7C2O60412 319 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms