RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 SBSPONQ8IVN8 264 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 FAM213BQ8TBF2 198 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 CLUHP3Q96NS8 147 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 TMEM167BQ9NRX6 74 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 MAP1LC3B2A6NCE7 125 aa12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 ZNF705FA8MVS1 300 aaPredicted RBP12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 SULT1A2P50226 295 aa12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 APOC4P55056 127 aa12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 MAP1LC3BQ9GZQ8 125 aa12.85□□□□□ -0.35
SLC6A6-209ENST00000622176 A8MTW9 85 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 M0R3E3 92 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 ICAM4Q14773 271 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 OR8A1Q8NGG7 326 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 ASCL2Q99929 193 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 Q9H3A6 140 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 NBEAL2Q6ZNJ1 2754 aa12.84□□□□□ -0.35
SLC6A6-209ENST00000622176 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 UBE2CO00762 179 aa12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 DUSP14O95147 198 aaKnown RBP12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
SLC6A6-209ENST00000622176 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
SLC6A6-209ENST00000622176 SFT2D1Q8WV19 159 aa12.82□□□□□ -0.36
SLC6A6-209ENST00000622176 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
SLC6A6-209ENST00000622176 GIG44P09565 113 aaPredicted RBP12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 H2AFB1P0C5Y9 115 aa12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 ZNF705DP0CH99 300 aaPredicted RBP12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 ZNF705BP0CI00 300 aaPredicted RBP12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 OR4B1Q8NGF8 309 aa12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 HUWE1Q7Z6Z7 4374 aaKnown RBP12.81□□□□□ -0.36
SLC6A6-209ENST00000622176 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 PGPA6NDG6 321 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 IGKV3-20P01619 116 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 PRB4P10163 310 aaPredicted RBP12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 HIST1H1AQ02539 215 aaPredicted RBP12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 Q6ZWC4 215 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 ARL6IP6Q8N6S5 226 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 OR10J6PQ8NGY7 276 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
SLC6A6-209ENST00000622176 A0A1W2PRE2 83 aa12.79□□□□□ -0.36
SLC6A6-209ENST00000622176 CSN1S1P47710 185 aa12.79□□□□□ -0.36
SLC6A6-209ENST00000622176 NUTF2P61970 127 aaKnown RBP12.79□□□□□ -0.36
SLC6A6-209ENST00000622176 NPIPB6E9PJ23 425 aa12.78□□□□□ -0.36
SLC6A6-209ENST00000622176 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
SLC6A6-209ENST00000622176 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
SLC6A6-209ENST00000622176 YTHDF2Q9Y5A9 579 aaKnown RBP12.78□□□□□ -0.36
SLC6A6-209ENST00000622176 TENM3Q9P273 2699 aa12.77□□□□□ -0.36
SLC6A6-209ENST00000622176 FAM74A7A6NL05 159 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 ZNF705EA8MWA4 302 aaPredicted RBP12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 C9orf47Q6ZRZ4 202 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 CMTM2Q8TAZ6 248 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
SLC6A6-209ENST00000622176 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 A0A1B0GV50 99 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 RBAKDNA6NC62 111 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 HBE1P02100 147 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 UBE2G2P60604 165 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 NKX6-2Q9C056 277 aaPredicted RBP12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 ZMAT4Q9H898 229 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 TP53TG1Q9Y2A0 90 aa12.76□□□□□ -0.37
SLC6A6-209ENST00000622176 TEX46H3BTG2 121 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 CT45A10P0DMU9 189 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 PPT1P50897 306 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 CCL20P78556 96 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 ERCC8Q13216 396 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 DEFB135Q30KP9 77 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 CSNK1G2-AS1Q8NCQ2 148 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 STAB2Q8WWQ8 2551 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 RNF183Q96D59 192 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 VGLL1Q99990 258 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 XCL2Q9UBD3 114 aa12.75□□□□□ -0.37
SLC6A6-209ENST00000622176 AMBPP02760 352 aa12.74□□□□□ -0.37
SLC6A6-209ENST00000622176 FXYD7P58549 80 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms