RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 ZNF506Q5JVG8 444 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 HCP5Q6MZN7 132 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 LCN15Q6UWW0 184 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 CYP2G1PQ6ZSU1 146 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 LHFPL4Q7Z7J7 247 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 OR10W1Q8NGF6 305 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 SUN5Q8TC36 379 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 MBD3L1Q8WWY6 194 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 ARPC1AQ92747 370 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 ACY3Q96HD9 319 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 LINC00052Q96N35 136 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 TBX15Q96SF7 602 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 MGST2Q99735 147 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 GGTLC1Q9BX51 225 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 NKX6-2Q9C056 277 aaPredicted RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 TMEM231Q9H6L2 316 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 SLC25A22Q9H936 323 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 RPRMQ9NS64 109 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 TECRQ9NZ01 308 aaKnown RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 GNG13Q9P2W3 67 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 VAX2Q9UIW0 290 aa3.55□□□□□ -1.84
VPS29-212ENST00000621131 F11RQ9Y624 299 aaKnown RBP3.55□□□□□ -1.84
VPS29-212ENST00000621131 CENPVL3A0A0U1RRI6 287 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 TCRBV4S1A1TA0A5B7 111 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 SEC14L6B5MCN3 397 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 F6UZH7 168 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 M0R036 132 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 NDUFS6O75380 124 aaKnown RBP3.54□□□□□ -1.84
VPS29-212ENST00000621131 HLA-DRB1P01911 266 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 REG1AP05451 166 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 CD5P06127 495 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 MDKP21741 143 aaPredicted RBP3.54□□□□□ -1.84
VPS29-212ENST00000621131 CNTFRP26992 372 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 OR10J1P30954 320 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 FCGR2BP31994 310 aaPredicted RBP3.54□□□□□ -1.84
VPS29-212ENST00000621131 NPBWR1P48145 328 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 FHITP49789 147 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 RND2P52198 227 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 CEBPGP53567 150 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 WT1-ASQ06250 92 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 SCGB2A2Q13296 93 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 GAMTQ14353 236 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 HAGHQ16775 308 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 SOHLH1Q5JUK2 328 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 C10orf55Q5SWW7 151 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 LINC00242Q5T6M2 205 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 MIC13Q5XKP0 118 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 ZNF562Q6V9R5 426 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 Q6ZVH6 145 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 Q6ZVQ6 151 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 COX8CQ7Z4L0 72 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 SLC35E3Q7Z769 313 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 RXFP4Q8TDU9 374 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 TRGV9Q99603 122 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 NIPSNAP3BQ9BS92 247 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 TMEM167BQ9NRX6 74 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 FUT9Q9Y231 359 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 PRELID1Q9Y255 219 aa3.54□□□□□ -1.84
VPS29-212ENST00000621131 CARHSP1Q9Y2V2 147 aaKnown RBP3.54□□□□□ -1.84
VPS29-212ENST00000621131 DOCK11Q5JSL3 2073 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 B4DEV8 164 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 PDE6DO43924 150 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 GNG7O60262 68 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 OR7C2O60412 319 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 CLN5O75503 358 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 TGFAP01135 160 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 LINC00869P0C866 280 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 AREGP15514 252 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 FGF8P55075 233 aaPredicted RBP3.53□□□□□ -1.84
VPS29-212ENST00000621131 MEF2BQ02080 365 aaPredicted RBP3.53□□□□□ -1.84
VPS29-212ENST00000621131 RHEBQ15382 184 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 TMEM249Q2WGJ8 235 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 FAM74A3Q4VXF1 159 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 AKIRIN2Q53H80 203 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 Q56UQ5 140 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 C10orf113Q5VZT2 155 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 CST9LP1Q5W188 147 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 CYB5R2Q6BCY4 276 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 PVRIGQ6DKI7 326 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 CFAP161Q6P656 301 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 UNQ5815/PRO19632Q6UWF5 114 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 TTC9CQ8N5M4 171 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 Q8N6K4 173 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 STXBP6Q8NFX7 210 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 OR4X1Q8NH49 305 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 RBM14Q96PK6 669 aaKnown RBP3.53□□□□□ -1.84
VPS29-212ENST00000621131 VSIRQ9H7M9 311 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 ZNF355PQ9NSJ1 428 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 ARL2-SNX15V9GYD0 113 aa3.53□□□□□ -1.84
VPS29-212ENST00000621131 MALRD1Q5VYJ5 2156 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 A0A0U1RQK1 487 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 C11orf94C9JXX5 98 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 TMEM250H0YL14 139 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 H3BUX3 64 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 FCN1O00602 326 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 HYPMO75409 117 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 YIF1AO95070 293 aa3.52□□□□□ -1.85
VPS29-212ENST00000621131 LY6G6DO95868 133 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms