RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LCE6AA0A183 80 aa12.03□□□□□ -0.48
CD40-207ENST00000620709 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
CD40-207ENST00000620709 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
CD40-207ENST00000620709 NKX6-2Q9C056 277 aaPredicted RBP12.03□□□□□ -0.48
CD40-207ENST00000620709 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.48
CD40-207ENST00000620709 HIST1H1EP10412 219 aaKnown RBP12.02□□□□□ -0.48
CD40-207ENST00000620709 RBPMS2Q6ZRY4 209 aaKnown RBP12.02□□□□□ -0.48
CD40-207ENST00000620709 SVBPQ8N300 66 aa12.02□□□□□ -0.48
CD40-207ENST00000620709 C20orf24Q9BUV8 137 aa12.02□□□□□ -0.48
CD40-207ENST00000620709 A8MWP6 167 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 NBEAP1P0C6P0 100 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
CD40-207ENST00000620709 FAM90A2PQ658T7 463 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 BLNKQ8WV28 456 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 NPPCP23582 126 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 CRYBB3P26998 211 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 CCDC28AQ8IWP9 274 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 TMEM190Q8WZ59 177 aa12.01□□□□□ -0.49
CD40-207ENST00000620709 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
CD40-207ENST00000620709 GGTLC3B5MD39 225 aa12□□□□□ -0.49
CD40-207ENST00000620709 MRPS12O15235 138 aaKnown RBP12□□□□□ -0.49
CD40-207ENST00000620709 IGLC2P0DOY2 106 aa12□□□□□ -0.49
CD40-207ENST00000620709 C1orf194Q5T5A4 169 aa12□□□□□ -0.49
CD40-207ENST00000620709 OR8I2Q8N0Y5 310 aa12□□□□□ -0.49
CD40-207ENST00000620709 GPR82Q96P67 336 aa12□□□□□ -0.49
CD40-207ENST00000620709 BUB3O43684 328 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 SNAPINO95295 136 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 RPUSD4Q96CM3 377 aaKnown RBP11.99□□□□□ -0.49
CD40-207ENST00000620709 TCEAL7Q9BRU2 100 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 NIPSNAP3BQ9BS92 247 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 ZNF586Q9NXT0 402 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 U3KQE9 123 aa11.99□□□□□ -0.49
CD40-207ENST00000620709 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
CD40-207ENST00000620709 SCO2A0A1W2PP80 73 aa11.98□□□□□ -0.49
CD40-207ENST00000620709 H3BQ15 152 aa11.98□□□□□ -0.49
CD40-207ENST00000620709 ZNF207O43670 478 aaKnown RBP11.98□□□□□ -0.49
CD40-207ENST00000620709 RANP62826 216 aaKnown RBP11.98□□□□□ -0.49
CD40-207ENST00000620709 SUMO1P63165 101 aaKnown RBP11.98□□□□□ -0.49
CD40-207ENST00000620709 IL17DQ8TAD2 202 aa11.98□□□□□ -0.49
CD40-207ENST00000620709 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
CD40-207ENST00000620709 PARLQ9H300 379 aa11.98□□□□□ -0.49
CD40-207ENST00000620709 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
CD40-207ENST00000620709 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
CD40-207ENST00000620709 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
CD40-207ENST00000620709 PDE6HQ13956 83 aa11.97□□□□□ -0.49
CD40-207ENST00000620709 ZNF674Q2M3X9 581 aa11.97□□□□□ -0.49
CD40-207ENST00000620709 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
CD40-207ENST00000620709 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 A0A1W2PS18 150 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 H3BTX0 84 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 NDUFB4O95168 129 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 ATF4P18848 351 aaPredicted RBP11.96□□□□□ -0.49
CD40-207ENST00000620709 GALR1P47211 349 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 LYPD1Q8N2G4 141 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 GRAMD2BQ96HH9 432 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 Q9H3A6 140 aa11.96□□□□□ -0.49
CD40-207ENST00000620709 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
CD40-207ENST00000620709 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
CD40-207ENST00000620709 K7EMT4 169 aa11.96□□□□□ -0.5
CD40-207ENST00000620709 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.5
CD40-207ENST00000620709 A0A087X0K7 114 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 PGPA6NDG6 321 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 M0R036 132 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 ZNF253O75346 499 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
CD40-207ENST00000620709 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
CD40-207ENST00000620709 PNRC1Q12796 327 aaPredicted RBP11.95□□□□□ -0.5
CD40-207ENST00000620709 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
CD40-207ENST00000620709 IGHV3OR16-13A0A075B7E8 117 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 IGHV3-74A0A0B4J1X5 117 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 BMI1P35226 326 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 AKR1C3P42330 323 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 PSG9Q00887 426 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 SIGLEC15Q6ZMC9 328 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 C2CD4CQ8TF44 421 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
CD40-207ENST00000620709 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
CD40-207ENST00000620709 IGHV7-4-1A0A0J9YVY3 117 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 SLC17A3O00476 420 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 PEX7O00628 323 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 MEOX2P50222 304 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 TMEM241Q24JQ0 296 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 ATRAIDQ6UW56 229 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 GLMPQ8WWB7 406 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
CD40-207ENST00000620709 CMTM2Q8TAZ6 248 aa11.92□□□□□ -0.5
CD40-207ENST00000620709 SDF2L1Q9HCN8 221 aa11.92□□□□□ -0.5
CD40-207ENST00000620709 HYDINQ4G0P3 5121 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms