RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 Q6ZTC4 211 aa11.49□□□□□ -0.57
BRCA1-228ENST00000618469 ZNF767PQ75MW2 155 aa11.49□□□□□ -0.57
BRCA1-228ENST00000618469 SCGB1C1Q8TD33 95 aa11.49□□□□□ -0.57
BRCA1-228ENST00000618469 SLC25A2Q9BXI2 301 aa11.49□□□□□ -0.57
BRCA1-228ENST00000618469 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
BRCA1-228ENST00000618469 TRBV19A0A075B6N1 114 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 CRXO43186 299 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-228ENST00000618469 ZNF253O75346 499 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
BRCA1-228ENST00000618469 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 WFDC1Q9HC57 220 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
BRCA1-228ENST00000618469 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
BRCA1-228ENST00000618469 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
BRCA1-228ENST00000618469 GIPP09681 153 aaPredicted RBP11.47□□□□□ -0.57
BRCA1-228ENST00000618469 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
BRCA1-228ENST00000618469 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
BRCA1-228ENST00000618469 TIMM9Q9Y5J7 89 aa11.47□□□□□ -0.57
BRCA1-228ENST00000618469 M0R3E3 92 aa11.46□□□□□ -0.57
BRCA1-228ENST00000618469 NDUFB4O95168 129 aa11.46□□□□□ -0.57
BRCA1-228ENST00000618469 PDE6HQ13956 83 aa11.46□□□□□ -0.57
BRCA1-228ENST00000618469 C2CD4CQ8TF44 421 aa11.46□□□□□ -0.57
BRCA1-228ENST00000618469 PARD6GQ9BYG4 376 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-228ENST00000618469 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 OR7C2O60412 319 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 OR10J4P0C629 311 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 CDKN1BP46527 198 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 OXA1LQ15070 435 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 ASB13Q8WXK3 278 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
BRCA1-228ENST00000618469 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 OR51M1Q9H341 326 aa11.45□□□□□ -0.58
BRCA1-228ENST00000618469 DNAH10Q8IVF4 4471 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-228ENST00000618469 SPART-AS1P0CW21 52 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
BRCA1-228ENST00000618469 Q5BKY6 102 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
BRCA1-228ENST00000618469 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
BRCA1-228ENST00000618469 HECTD4Q9Y4D8 3996 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 FXYD6-FXYD2A0A087WZ82 144 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 TEX48A0A1B0GUV7 120 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 IGLL5B9A064 214 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 J3KRW8 73 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 PRM2P04554 102 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 ZNF266Q14584 549 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 ICAM4Q14773 271 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 PRELID1Q9Y255 219 aa11.43□□□□□ -0.58
BRCA1-228ENST00000618469 DEFB131BA0A096LNP1 70 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
BRCA1-228ENST00000618469 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 TSPOP30536 169 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 TAS2R45P59539 299 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 GFI1BQ5VTD9 330 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 FAM122CQ6P4D5 195 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 HSD17B11Q8NBQ5 300 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 OR2T35Q8NGX2 323 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 LINC01587Q99440 93 aa11.42□□□□□ -0.58
BRCA1-228ENST00000618469 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 HTN1P15515 57 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 LEPP41159 167 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 RAB2AP61019 212 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-228ENST00000618469 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 RYR1P21817 5038 aa11.41□□□□□ -0.58
BRCA1-228ENST00000618469 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
BRCA1-228ENST00000618469 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-228ENST00000618469 RNF222A6NCQ9 220 aa11.4□□□□□ -0.58
BRCA1-228ENST00000618469 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-228ENST00000618469 M6PRP20645 277 aa11.4□□□□□ -0.58
BRCA1-228ENST00000618469 TAS2R60P59551 318 aa11.4□□□□□ -0.58
BRCA1-228ENST00000618469 ERCC8Q13216 396 aa11.4□□□□□ -0.58
BRCA1-228ENST00000618469 INO80EQ8NBZ0 244 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-228ENST00000618469 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 H7BYZ3 331 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 AZU1P20160 251 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 TCTAP57738 103 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 C16orf74Q96GX8 76 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
BRCA1-228ENST00000618469 HTN3P15516 51 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms