RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 LINC00052Q96N35 136 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 TRGV9Q99603 122 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 C11orf1Q9H5F2 150 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 TMEM231Q9H6L2 316 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SDF2L1Q9HCN8 221 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 NRN1Q9NPD7 142 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 GSKIPQ9P0R6 139 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 XCL2Q9UBD3 114 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 LSM5Q9Y4Y9 91 aaKnown RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 IGHV3OR16-12A0A075B7B8 117 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 C7orf66A4D0T2 115 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 NAP1L6A6NFF2 107 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 FAM24AA6NFZ4 105 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 ZNF98A6NK75 572 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 ZNF705EA8MWA4 302 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 H3BRN7 92 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 K7EPK0 472 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SIX6O95475 246 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 TCRBP04435 133 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 HLA-DRB4P13762 266 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 NKX2-1P43699 371 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 RAB11AP62491 216 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 VWC2Q2TAL6 325 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SERTAD4-AS1Q5TG53 156 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 TMEM14EPQ6UXP3 125 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 CYP2G1PQ6ZSU1 146 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SLC7A5P1Q8MH63 180 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 BPIFCQ8NFQ6 507 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 COQ8AQ8NI60 647 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 C11orf45Q8TAV5 145 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 PPP1R14BQ96C90 147 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 MGST2Q99735 147 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 PARD6GQ9BYG4 376 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 C11orf68Q9H3H3 251 aaKnown RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 SAV1Q9H4B6 383 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 NUDT15Q9NV35 164 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 HLA-DRB4X5D2U9 266 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 KMT2AQ03164 3969 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 TRAV5A0A0B4J249 113 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 IGSF23A1L1A6 192 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 NUPR2A6NF83 97 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 SNRPGP15A8MWD9 76 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 SLC17A3O00476 420 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 MRPS12O15235 138 aaKnown RBP3.26□□□□□ -1.89
CUL3-216ENST00000617432 ATP6V1G1O75348 118 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 MED6O75586 246 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 CST7O76096 145 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 LINC00869P0C866 280 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 SPP1P10451 314 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 EMP1P54849 157 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 FGL1Q08830 312 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 C12orf74Q32Q52 190 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 FAM78BQ5VT40 261 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 AMTNQ6UX39 209 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 NOXA1Q86UR1 476 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 C1orf158Q8N1D5 194 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 OR4B1Q8NGF8 309 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 ZNF431Q8TF32 576 aaPredicted RBP3.26□□□□□ -1.89
CUL3-216ENST00000617432 GATAD1Q8WUU5 269 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 NARS2Q96I59 477 aaKnown RBP3.26□□□□□ -1.89
CUL3-216ENST00000617432 SMIM8Q96KF7 97 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 C7orf50Q9BRJ6 194 aaKnown RBP3.26□□□□□ -1.89
CUL3-216ENST00000617432 RSG1Q9BU20 258 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
CUL3-216ENST00000617432 NDUFA13Q9P0J0 144 aa3.26□□□□□ -1.89
CUL3-216ENST00000617432 TRAV12-2A0A075B6T6 113 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 A0A0J9YX75 114 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 UBE2L5PA0A1B0GUS4 154 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CENPXA8MT69 81 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 IGLL5B9A064 214 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 PRAC2D3DTV9 90 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 M0R2Z0 102 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CRXO43186 299 aaPredicted RBP3.25□□□□□ -1.89
CUL3-216ENST00000617432 EIF3GO75821 320 aaKnown RBP eCLIP3.25□□□□□ -1.89
CUL3-216ENST00000617432 IFNA21P01568 189 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 IL5P05113 134 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CD5P06127 495 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 OR5G3P0C626 314 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CDKN1BP46527 198 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 PSMB3P49720 205 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CNN1P51911 297 aaKnown RBP3.25□□□□□ -1.89
CUL3-216ENST00000617432 CMC4P56277 68 aaPredicted RBP3.25□□□□□ -1.89
CUL3-216ENST00000617432 S100A10P60903 97 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 DLK1P80370 383 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 IL15RAQ13261 267 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 TMEM41BQ5BJD5 291 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 MIC13Q5XKP0 118 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 TMEM88Q6PEY1 159 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
CUL3-216ENST00000617432 TMEM144Q7Z5S9 345 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 BAP18Q8IXM2 172 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 C12orf45Q8N5I9 185 aaPredicted RBP3.25□□□□□ -1.89
CUL3-216ENST00000617432 TMEM217Q8N7C4 229 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 DEDD2Q8WXF8 326 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 TMEM37Q8WXS4 190 aa3.25□□□□□ -1.89
CUL3-216ENST00000617432 CIB3Q96Q77 187 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms