RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PRELID1Q9Y255 219 aa8.6□□□□□ -1.03
SLIRP-212ENST00000613856 TRAV8-2A0A0B4J237 113 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 PGPA6NDG6 321 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 ISLRO14498 428 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 SFTA3P0C7M3 94 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 IGLL1P15814 213 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 EXOC3-AS1Q8N2X6 119 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 CYB561D1Q8N8Q1 229 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 OR2K2Q8NGT1 345 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 DCANP1Q8TF63 244 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 HIST1H2BAQ96A08 127 aa8.59□□□□□ -1.03
SLIRP-212ENST00000613856 RPUSD4Q96CM3 377 aaKnown RBP8.59□□□□□ -1.03
SLIRP-212ENST00000613856 SERTM2A0A1B0GWG4 89 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 PEX7O00628 323 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 TSPAN4O14817 238 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 SLC25A5P05141 298 aaKnown RBP8.58□□□□□ -1.04
SLIRP-212ENST00000613856 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 DEFB114Q30KQ6 69 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 CMTM2Q8TAZ6 248 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 C2CD4CQ8TF44 421 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 C16orf92Q96LL3 132 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 ATG101Q9BSB4 218 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
SLIRP-212ENST00000613856 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 K7EQG2 157 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 TCRAP04437 139 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
SLIRP-212ENST00000613856 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 TMEM61Q8N0U2 210 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 WWC2-AS2Q96NR7 200 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 SEC11CQ9BY50 192 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 PARLQ9H300 379 aa8.57□□□□□ -1.04
SLIRP-212ENST00000613856 M0R3E3 92 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 SAP30O75446 220 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 ID1P41134 155 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 AKR1C3P42330 323 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 CSN1S1P47710 185 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 INSL3P51460 131 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 GNG5P63218 68 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 PSG3Q16557 428 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 CD300EQ496F6 205 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-212ENST00000613856 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
SLIRP-212ENST00000613856 RBPMS2Q6ZRY4 209 aaKnown RBP8.56□□□□□ -1.04
SLIRP-212ENST00000613856 SPAG8Q99932 426 aaPredicted RBP8.56□□□□□ -1.04
SLIRP-212ENST00000613856 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
SLIRP-212ENST00000613856 IGKV3-7A0A075B6H7 116 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 TRBV6-1A0A0K0K1D8 114 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 RBAKDNA6NC62 111 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 DIRC3C9JPN6 131 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 F8W036 122 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
SLIRP-212ENST00000613856 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
SLIRP-212ENST00000613856 S100A1P23297 94 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 HLA-DMBP28068 263 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 CNN1P51911 297 aaKnown RBP8.55□□□□□ -1.04
SLIRP-212ENST00000613856 DEFB121Q5J5C9 76 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 GBGT1Q8N5D6 347 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 RNF182Q8N6D2 247 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 TMEM75Q8N9X5 138 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
SLIRP-212ENST00000613856 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
SLIRP-212ENST00000613856 SACSQ9NZJ4 4579 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 OR4C46A6NHA9 309 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 FBLL1A6NHQ2 334 aaKnown RBP8.54□□□□□ -1.04
SLIRP-212ENST00000613856 C9JCJ5 164 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 K7EQM0 130 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
SLIRP-212ENST00000613856 CEBPGP53567 150 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 TAS2R60P59551 318 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 SNRPD3P62318 126 aaKnown RBP8.54□□□□□ -1.04
SLIRP-212ENST00000613856 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 C9orf66Q5T8R8 295 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 LCN12Q6JVE5 192 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 GOLT1AQ6ZVE7 132 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 FMC1Q96HJ9 113 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 SELENOKQ9Y6D0 94 aa8.54□□□□□ -1.04
SLIRP-212ENST00000613856 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 ZNF674Q2M3X9 581 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 FAM24BQ8N5W8 94 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 ZNF738Q8NE65 137 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 IGF2BP2-AS1Q96M15 143 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms