RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 OR2B3O76000 313 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 TCL1BO95988 128 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 OR4E1P0C645 316 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 COX6A1P12074 109 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
TARDBP-214ENST00000613177 G0S2P27469 103 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 SSR2P43308 183 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 YPEL3P61236 119 aaPredicted RBP0.95□□□□□ -2.26
TARDBP-214ENST00000613177 ARF6P62330 175 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 C10orf55Q5SWW7 151 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 OR4D11Q8NGI4 311 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 OR13D1Q8NGV5 346 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 LXNQ9BS40 222 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 TMEM133Q9H2Q1 129 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 SS18L2Q9UHA2 77 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 UTP11Q9Y3A2 253 aaKnown RBP0.95□□□□□ -2.26
TARDBP-214ENST00000613177 Q9Y3F1 56 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 ARL5AQ9Y689 179 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 A0A0C4DFX4 3053 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 TRIOO75962 3097 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 LAMA1P25391 3075 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 MYH10P35580 1976 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 EML5Q05BV3 1969 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 VCANP13611 3396 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 DENND4CQ5VZ89 1909 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 MYOFQ9NZM1 2061 aa0.95□□□□□ -2.26
TARDBP-214ENST00000613177 ZNF106Q9H2Y7 1883 aaKnown RBP0.95□□□□□ -2.26
TARDBP-214ENST00000613177 PATJQ8NI35 1801 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 NUMA1Q14980 2115 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 PTPRDP23468 1912 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 TRAV14DV4A0A0A6YYC5 116 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 ARL5CA6NH57 179 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 CCL16O15467 120 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 OR2T1O43869 369 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 CST8O60676 142 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 C1QBP02746 253 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 CXCL8P10145 99 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 RNASE4P34096 147 aaKnown RBP0.94□□□□□ -2.26
TARDBP-214ENST00000613177 ARPP19P56211 112 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 BRMS1LQ5PSV4 323 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 SOSTDC1Q6X4U4 206 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 Q6ZSA8 131 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 EXOC3-AS1Q8N2X6 119 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 LINC00471Q8N535 108 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 LINC00311Q8N616 119 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 LINC00301Q8NCQ3 95 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 OR10J5Q8NHC4 309 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 FAM172AQ8WUF8 416 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 TCEAL4Q96EI5 215 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 C2orf50Q96LR7 162 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 PARVBQ9HBI1 364 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 PDE4DIPQ5VU43 2346 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 KIAA1549LQ6ZVL6 1849 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
TARDBP-214ENST00000613177 DCHS1Q96JQ0 3298 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 HELZP42694 1942 aaKnown RBP0.93□□□□□ -2.26
TARDBP-214ENST00000613177 CEP192Q8TEP8 1941 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 C5orf67F2Z3F1 127 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 H3BQV1 296 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 BANF1O75531 89 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 ATG12O94817 140 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 LYNX1P0DP58 116 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 NCALDP61601 193 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 HSPE1P61604 102 aaKnown RBP0.93□□□□□ -2.26
TARDBP-214ENST00000613177 GNG5P63218 68 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 TSNQ15631 228 aaKnown RBP0.93□□□□□ -2.26
TARDBP-214ENST00000613177 DEFB113Q30KQ7 82 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 LYRM7Q5U5X0 104 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
TARDBP-214ENST00000613177 AP3S1Q92572 193 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 SLAMF6Q96DU3 332 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 SERPINI1Q99574 410 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 HOPXQ9BPY8 73 aaPredicted RBP0.93□□□□□ -2.26
TARDBP-214ENST00000613177 TAS2R4Q9NYW5 299 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 EPDR1Q9UM22 224 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 TRANK1O15050 2925 aa0.93□□□□□ -2.26
TARDBP-214ENST00000613177 NUP210Q8TEM1 1887 aaPredicted RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 CUL9Q8IWT3 2517 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 FLG2Q5D862 2391 aaPredicted RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 DMXL1Q9Y485 3027 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 MDC1Q14676 2089 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 CFAP54Q96N23 3096 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 TECTAO75443 2155 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 DOCK10Q96BY6 2186 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 TRBV19A0A075B6N1 114 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 FUOMA2VDF0 154 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 LOC730098B7Z3J9 87 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 TMEM238C9JI98 176 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 SULT1B1O43704 296 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 MRPS14O60783 128 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 LYZL6O75951 148 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 UBL3O95164 117 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 GADD45GO95257 159 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 BRS3P32247 399 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 DYNLT1P63172 113 aa0.92□□□□□ -2.26
TARDBP-214ENST00000613177 EIF5AP63241 154 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 RPL19P84098 196 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 TFAMQ00059 246 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 KRR1Q13601 381 aaKnown RBP0.92□□□□□ -2.26
TARDBP-214ENST00000613177 ESRGQ1W209 222 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms