RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 C20orf144Q9BQM9 153 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 H3BTX0 84 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 OR7C2O60412 319 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 LEPP41159 167 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 FFAR4Q5NUL3 377 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 MORN5Q5VZ52 161 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 Q6ZTC4 211 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 CCDC28AQ8IWP9 274 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 BLNKQ8WV28 456 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 NIPSNAP3BQ9BS92 247 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 RNF126Q9BV68 326 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 SMIM3Q9BZL3 60 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 OR51M1Q9H341 326 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 TRBV19A0A075B6N1 114 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 A0A1W2PPV4 95 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 H3BQ15 152 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 CSN1S1P47710 185 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 ACOT6Q3I5F7 207 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-208ENST00000612050 KHDC3LQ587J8 217 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 BAP18Q8IXM2 172 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 INO80EQ8NBZ0 244 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-208ENST00000612050 SAT2Q96F10 170 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-208ENST00000612050 PAXXQ9BUH6 204 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 PARD6GQ9BYG4 376 aaPredicted RBP8.88□□□□□ -0.99
CBWD3-208ENST00000612050 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 FUT9Q9Y231 359 aa8.88□□□□□ -0.99
CBWD3-208ENST00000612050 TRAV12-2A0A075B6T6 113 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 SLC17A3O00476 420 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 NBEAP1P0C6P0 100 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 HTN1P15515 57 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 TAS2R60P59551 318 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 DAD1P61803 113 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 FAM222AQ5U5X8 452 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
CBWD3-208ENST00000612050 C16orf74Q96GX8 76 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 NDUFAF3Q9BU61 184 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
CBWD3-208ENST00000612050 YTHDF2Q9Y5A9 579 aaKnown RBP8.87□□□□□ -0.99
CBWD3-208ENST00000612050 H7BYZ3 331 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 PYYP10082 97 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 C12orf74Q32Q52 190 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 FAM74A1Q5RGS3 127 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 TMEM78Q5T7P6 136 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 LINC00477Q96M19 166 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 ODF3Q96PU9 254 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 DKK2Q9UBU2 259 aa8.86□□□□□ -0.99
CBWD3-208ENST00000612050 IGHV4-4A0A075B6R2 117 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 LYRM9A8MSI8 78 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 ZNF705GA8MUZ8 300 aaPredicted RBP8.85□□□□□ -0.99
CBWD3-208ENST00000612050 GIPP09681 153 aaPredicted RBP8.85□□□□□ -0.99
CBWD3-208ENST00000612050 UBE2L3P68036 154 aaKnown RBP8.85□□□□□ -0.99
CBWD3-208ENST00000612050 ICAM4Q14773 271 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 OXA1LQ15070 435 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 FCN2Q15485 313 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 GCSAMLQ5JQS6 135 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 ZNF767PQ75MW2 155 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 FAM210BQ96KR6 192 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 SLC25A2Q9BXI2 301 aa8.85□□□□□ -0.99
CBWD3-208ENST00000612050 KMT2CQ8NEZ4 4911 aaKnown RBP8.84□□□□□ -0.99
CBWD3-208ENST00000612050 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
CBWD3-208ENST00000612050 HTN3P15516 51 aa8.84□□□□□ -0.99
CBWD3-208ENST00000612050 M6PRP20645 277 aa8.84□□□□□ -0.99
CBWD3-208ENST00000612050 FAM122CQ6P4D5 195 aa8.84□□□□□ -0.99
CBWD3-208ENST00000612050 LYPD1Q8N2G4 141 aa8.84□□□□□ -0.99
CBWD3-208ENST00000612050 BORCS7-ASMTA0A0B4J1R7 106 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 SNURFLB1AK76 121 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 NPIPB6E9PJ23 425 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 J3KRW8 73 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 MBP02144 154 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 SLC25A5P05141 298 aaKnown RBP8.83□□□□□ -1
CBWD3-208ENST00000612050 OR10J4P0C629 311 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 PQLC2Q6ZP29 291 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 EXOC3-AS1Q8N2X6 119 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 CMTM2Q8TAZ6 248 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 TMEM263Q8WUH6 116 aaKnown RBP8.83□□□□□ -1
CBWD3-208ENST00000612050 AQP10Q96PS8 301 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
CBWD3-208ENST00000612050 TENM2Q9NT68 2774 aa8.83□□□□□ -1
CBWD3-208ENST00000612050 PRAC2D3DTV9 90 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 M0R3E3 92 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 P0DMU3 169 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 FAM231AP0DMU4 169 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 FAM231CP0DMU5 169 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 RXFP4Q8TDU9 374 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 PYGO2Q9BRQ0 406 aa8.82□□□□□ -1
CBWD3-208ENST00000612050 CSMD3Q7Z407 3707 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 FXYD6-FXYD2A0A087WZ82 144 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 TRAV12-3A0A0B4J271 114 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 GPX1P07203 203 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 DEFB130BP0DP73 79 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 DEFB130AP0DP74 79 aa8.81□□□□□ -1
CBWD3-208ENST00000612050 RANP62826 216 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms