RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 STAG3L3P0CL85 134 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 CNN1P51911 297 aaKnown RBP10.45□□□□□ -0.74
CTSA-219ENST00000607841 BAP18Q8IXM2 172 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 LYPD1Q8N2G4 141 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 OR10J6PQ8NGY7 276 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 ZNF503Q96F45 646 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 OVOL2Q9BRP0 275 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 RETNQ9HD89 108 aa10.45□□□□□ -0.74
CTSA-219ENST00000607841 UMAD1C9J7I0 102 aa10.44□□□□□ -0.74
CTSA-219ENST00000607841 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
CTSA-219ENST00000607841 CXorf1O96002 111 aa10.44□□□□□ -0.74
CTSA-219ENST00000607841 HIST1H1AQ02539 215 aaPredicted RBP10.44□□□□□ -0.74
CTSA-219ENST00000607841 EIF5AL1Q6IS14 154 aaKnown RBP10.44□□□□□ -0.74
CTSA-219ENST00000607841 PPP1R14DQ9NXH3 145 aa10.44□□□□□ -0.74
CTSA-219ENST00000607841 CTXND1A0A1B0GTU2 59 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 A8MTW9 85 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 ZNF705FA8MVS1 300 aaPredicted RBP10.43□□□□□ -0.74
CTSA-219ENST00000607841 EIF3GO75821 320 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTSA-219ENST00000607841 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
CTSA-219ENST00000607841 ICAM4Q14773 271 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 FAM74A1Q5RGS3 127 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 EXOC3-AS1Q8N2X6 119 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 TMEM167BQ9NRX6 74 aa10.43□□□□□ -0.74
CTSA-219ENST00000607841 HUWE1Q7Z6Z7 4374 aaKnown RBP10.42□□□□□ -0.74
CTSA-219ENST00000607841 AMBPP02760 352 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 GIG44P09565 113 aaPredicted RBP10.42□□□□□ -0.74
CTSA-219ENST00000607841 ZNF705DP0CH99 300 aaPredicted RBP10.42□□□□□ -0.74
CTSA-219ENST00000607841 ZNF705BP0CI00 300 aaPredicted RBP10.42□□□□□ -0.74
CTSA-219ENST00000607841 CSN1S1P47710 185 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 CD300CQ08708 224 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 SLC51BQ86UW2 128 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 RARRES2Q99969 163 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 Q9H3A6 140 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
CTSA-219ENST00000607841 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 M0R3E3 92 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 GCHFRP30047 84 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 RXFP4Q8TDU9 374 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 WWC2-AS2Q96NR7 200 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 SLC35B3Q9H1N7 401 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
CTSA-219ENST00000607841 FXYD7P58549 80 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 C9orf62Q8N4C0 152 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 CSNK1G2-AS1Q8NCQ2 148 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 CMTM2Q8TAZ6 248 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 TMED6Q8WW62 240 aa10.4□□□□□ -0.74
CTSA-219ENST00000607841 PGPA6NDG6 321 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 TSPOP30536 169 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 RAB5CP51148 216 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 ARL6IP6Q8N6S5 226 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
CTSA-219ENST00000607841 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 CDKN1BP46527 198 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 FAM213BQ8TBF2 198 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 IGF2BP2-AS1Q96M15 143 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 ODF3Q96PU9 254 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
CTSA-219ENST00000607841 ZNF705EA8MWA4 302 aaPredicted RBP10.37□□□□□ -0.75
CTSA-219ENST00000607841 M0R2Z0 102 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 INSP01308 110 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
CTSA-219ENST00000607841 MIFP14174 115 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 LEPP41159 167 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 TMEM78Q5T7P6 136 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 C9orf47Q6ZRZ4 202 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 EDA2RQ9HAV5 297 aa10.37□□□□□ -0.75
CTSA-219ENST00000607841 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 RBAKDNA6NC62 111 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 SLC25A5P05141 298 aaKnown RBP10.36□□□□□ -0.75
CTSA-219ENST00000607841 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 FHITP49789 147 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
CTSA-219ENST00000607841 ZNF705AQ6ZN79 300 aaPredicted RBP10.36□□□□□ -0.75
CTSA-219ENST00000607841 SFT2D1Q8WV19 159 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
CTSA-219ENST00000607841 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
CTSA-219ENST00000607841 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
CTSA-219ENST00000607841 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
CTSA-219ENST00000607841 SERTM2A0A1B0GWG4 89 aa10.35□□□□□ -0.75
CTSA-219ENST00000607841 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
CTSA-219ENST00000607841 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
CTSA-219ENST00000607841 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms