RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 DIRC3C9JPN6 131 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 M0R3E3 92 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 SAP30O75446 220 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 ADCYAP1P18509 176 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 ID1P41134 155 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 RPL11P62913 178 aaKnown RBP12.37□□□□□ -0.43
PMF1-206ENST00000606952 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 FAM74A3Q4VXF1 159 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 MCRIP2Q9BUT9 160 aaKnown RBP12.37□□□□□ -0.43
PMF1-206ENST00000606952 PARLQ9H300 379 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
PMF1-206ENST00000606952 STAB1Q9NY15 2570 aa12.37□□□□□ -0.43
PMF1-206ENST00000606952 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
PMF1-206ENST00000606952 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 CSN1S1P47710 185 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 GNG5P63218 68 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 C9orf66Q5T8R8 295 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 RBPMS2Q6ZRY4 209 aaKnown RBP12.36□□□□□ -0.43
PMF1-206ENST00000606952 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 C20orf173Q96LM9 149 aa12.36□□□□□ -0.43
PMF1-206ENST00000606952 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
PMF1-206ENST00000606952 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 S100A9P06702 114 aaKnown RBP12.35□□□□□ -0.43
PMF1-206ENST00000606952 AKR1C3P42330 323 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 TAS2R60P59551 318 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 SOHLH1Q5JUK2 328 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 LCN12Q6JVE5 192 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
PMF1-206ENST00000606952 ZNF256Q9Y2P7 627 aaPredicted RBP12.35□□□□□ -0.43
PMF1-206ENST00000606952 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 C9JCJ5 164 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 CNN1P51911 297 aaKnown RBP12.34□□□□□ -0.43
PMF1-206ENST00000606952 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 LINC00052Q96N35 136 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 PPP1R14DQ9NXH3 145 aa12.34□□□□□ -0.43
PMF1-206ENST00000606952 IGKV3-7A0A075B6H7 116 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 IGLV2-11P01706 119 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
PMF1-206ENST00000606952 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.44
PMF1-206ENST00000606952 BEAN1Q3B7T3 259 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 IGFL4Q6B9Z1 124 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 GOLT1AQ6ZVE7 132 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 FAM24BQ8N5W8 94 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 IGF2BP2-AS1Q96M15 143 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 FAM110AQ9BQ89 295 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 DERL1Q9BUN8 251 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 SELENOKQ9Y6D0 94 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 LY96Q9Y6Y9 160 aa12.33□□□□□ -0.44
PMF1-206ENST00000606952 ZNF705FA8MVS1 300 aaPredicted RBP12.32□□□□□ -0.44
PMF1-206ENST00000606952 F8W036 122 aa12.32□□□□□ -0.44
PMF1-206ENST00000606952 K7EQM0 130 aa12.32□□□□□ -0.44
PMF1-206ENST00000606952 CD33P20138 364 aa12.32□□□□□ -0.44
PMF1-206ENST00000606952 S100A1P23297 94 aa12.32□□□□□ -0.44
PMF1-206ENST00000606952 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
PMF1-206ENST00000606952 ANK2Q01484 3957 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 TRBV20OR9-2A0A075B6H5 130 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 ZNF727A8MUV8 499 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 PRAC2D3DTV9 90 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 C9orf47Q6ZRZ4 202 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 GPR61Q9BZJ8 451 aa12.31□□□□□ -0.44
PMF1-206ENST00000606952 A8MTW9 85 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 NPIPB6E9PJ23 425 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 LTAP01374 205 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 ZNF688P0C7X2 276 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 TFPI2P48307 235 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 CMC4P56277 68 aaPredicted RBP12.3□□□□□ -0.44
PMF1-206ENST00000606952 COX8CQ7Z4L0 72 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 Q86TA4 180 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 WFDC3Q8IUB2 231 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 MAP6D1Q9H9H5 199 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 NAT8Q9UHE5 227 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
PMF1-206ENST00000606952 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
PMF1-206ENST00000606952 TRBV7-9A0A0J9YWB2 115 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
PMF1-206ENST00000606952 CEBPGP53567 150 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 UBE2G1P62253 170 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
PMF1-206ENST00000606952 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
PMF1-206ENST00000606952 ZNF674Q2M3X9 581 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 LINC00479Q96M42 142 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 MLST8Q9BVC4 326 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 SDF2L1Q9HCN8 221 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 LENEPQ9Y5L5 61 aa12.29□□□□□ -0.44
PMF1-206ENST00000606952 VWFP04275 2813 aa12.28□□□□□ -0.44
PMF1-206ENST00000606952 TRAV34A0A0B4J273 112 aa12.28□□□□□ -0.44
PMF1-206ENST00000606952 A0A0J9YX75 114 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms