RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 LOC285556D6RIA3 1793 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 KCPQ6ZWJ8 1503 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 VBP1P61758 197 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 FOXI2Q6ZQN5 318 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 PHF5AQ7RTV0 110 aaKnown RBP0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 MAP1LC3BQ9GZQ8 125 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 TAF9BQ9HBM6 251 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 TRPM7Q96QT4 1865 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 ATG2AQ2TAZ0 1938 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 BDP1A6H8Y1 2624 aa0.3□□□□□ -2.36
RNU6-88P-201ENST00000606801 NUPR2A6NF83 97 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 IFNA4P05014 189 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 HBBP68871 147 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 RPL19P84098 196 aaKnown RBP0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 MIR22HGQ0VDD5 57 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 LTC4SQ16873 150 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 ZCCHC23Q6ZST2 131 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 IFT20Q8IY31 132 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 NUP35Q8NFH5 326 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 OR13C6PQ8NH95 151 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 PBDC1Q9BVG4 233 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 BCORL1Q5H9F3 1711 aa0.29□□□□□ -2.36
RNU6-88P-201ENST00000606801 IGHV3-33P01772 117 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 APOA2P02652 100 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 FXYD4P59646 89 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 FKBP1CQ5VVH2 108 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 LINC00269Q8N2A0 174 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 PLEKHB2Q96CS7 222 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 MALSU1Q96EH3 234 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 HOPXQ9BPY8 73 aaPredicted RBP0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 RTL8AQ9BWD3 113 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 HSPB8Q9UJY1 196 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 RTL9Q8NET4 1388 aa0.28□□□□□ -2.36
RNU6-88P-201ENST00000606801 GLRXP35754 106 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 TAS2R41P59536 307 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 OCIAD2Q56VL3 154 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 ATOH7Q8N100 152 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 FAM216BQ8N7L0 139 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 AP3S1Q92572 193 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 OR2H1Q9GZK4 316 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 OTORQ9NRC9 128 aa0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 MUC5BQ9HC84 5762 aaPredicted RBP0.27□□□□□ -2.37
RNU6-88P-201ENST00000606801 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 MAST4O15021 2626 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 TRBV30A0A0K0K1B3 111 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 RPL35P42766 123 aaKnown RBP0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 STOML2Q9UJZ1 356 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 UFC1Q9Y3C8 167 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 TECPR2O15040 1411 aa0.26□□□□□ -2.37
RNU6-88P-201ENST00000606801 MYH1P12882 1939 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 FER1L6Q2WGJ9 1857 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 SYNMO15061 1565 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 ZNF727A8MUV8 499 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 GPR31O00270 319 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 LYRM1O43325 122 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 PPP1R2P41236 205 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 SPINT3P49223 89 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 RTL8BQ17RB0 113 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 CDC26Q8NHZ8 85 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 TCEAL2Q9H3H9 227 aaPredicted RBP0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 NIT2Q9NQR4 276 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 PLAC8Q9NZF1 115 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 MEGF8Q7Z7M0 2845 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 ABCA1O95477 2261 aa0.25□□□□□ -2.37
RNU6-88P-201ENST00000606801 KIAA1107Q9UPP5 1409 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 TMEM238C9JI98 176 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 CST7O76096 145 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 RPL37AP61513 92 aaKnown RBP0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 BASP1P80723 227 aaKnown RBP0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 ESPL1Q14674 2120 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 POU6F1Q14863 301 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 TMED4Q7Z7H5 227 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 PRR15Q8IV56 129 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 CCL4L1Q8NHW4 92 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 CST11Q9H112 138 aa0.24□□□□□ -2.37
RNU6-88P-201ENST00000606801 A0A096LPI6 279 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 A0A0J9YY99 117 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 H7BYZ3 331 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 PDE6GP18545 87 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 ZNF137PP52743 207 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 DIAPH2-AS1Q14236 149 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 C6orf52Q5T4I8 152 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 Q6ZQY7 126 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 Q86TA4 180 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 CCL19Q99731 98 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 LRTM1Q9HBL6 345 aa0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 ZCCHC11Q5TAX3 1644 aaKnown RBP0.23□□□□□ -2.37
RNU6-88P-201ENST00000606801 TRAPPC8Q9Y2L5 1435 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 CCL4P13236 92 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 VMA21Q3ZAQ7 101 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 LINC00299Q6ZSB3 139 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 PLAC4Q8WY50 150 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 DIRC1Q969H9 104 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 BORCS8Q96FH0 119 aa0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 AFDNP55196 1824 aaKnown RBP0.22□□□□□ -2.37
RNU6-88P-201ENST00000606801 CACNA1HO95180 2353 aa0.21□□□□□ -2.38
RNU6-88P-201ENST00000606801 TRDV1A0A1B0GX56 115 aa0.21□□□□□ -2.38
RNU6-88P-201ENST00000606801 MT-ND6P03923 174 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms