RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MLST8Q9BVC4 326 aa16.42■□□□□ 0.22
USP6NL-204ENST00000606752 TMEM213A2RRL7 107 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 A8MWP6 167 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 HLA-DMBP28068 263 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 BMI1P35226 326 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 LCN12Q6JVE5 192 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 C1QL4Q86Z23 238 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 NF1P21359 2839 aa16.41■□□□□ 0.22
USP6NL-204ENST00000606752 LINC01619G3V211 115 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 PFN1P07737 140 aaKnown RBP16.4■□□□□ 0.22
USP6NL-204ENST00000606752 FLI1Q01543 452 aaPredicted RBP16.4■□□□□ 0.22
USP6NL-204ENST00000606752 KLF5Q13887 457 aaPredicted RBP16.4■□□□□ 0.22
USP6NL-204ENST00000606752 Q86TA4 180 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 OSTCQ9NRP0 149 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 CLEC5AQ9NY25 188 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 TCF21O43680 179 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 S100PP25815 95 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 DEFB136Q30KP8 78 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 PRNTQ86SH4 94 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 KLHL30-AS1Q8NEE0 82 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 OR11H1Q8NG94 326 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 DPF1Q92782 380 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 PSG8Q9UQ74 426 aa16.4■□□□□ 0.22
USP6NL-204ENST00000606752 CUBNO60494 3623 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 TRAV8-2A0A0B4J237 113 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 CRLF1O75462 422 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 OR1N2Q8NGR9 330 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 IMMP2LQ96T52 175 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 ZFP30Q9Y2G7 519 aa16.39■□□□□ 0.21
USP6NL-204ENST00000606752 ZNF705FA8MVS1 300 aaPredicted RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 EDN2P20800 178 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 RPL11P62913 178 aaKnown RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 TMEM183AQ8IXX5 376 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 RNF182Q8N6D2 247 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 MRPL53Q96EL3 112 aaKnown RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 C16orf92Q96LL3 132 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 RNASE7Q9H1E1 156 aaKnown RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 NRN1Q9NPD7 142 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 TGIF2-C20orf24A0A0A6YYL0 155 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 FBLL1A6NHQ2 334 aaKnown RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 PRB4P10163 310 aaPredicted RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 CD28P10747 220 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 RAB5AP20339 215 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 IBA57Q5T440 356 aaKnown RBP16.38■□□□□ 0.21
USP6NL-204ENST00000606752 BIN3Q9NQY0 253 aa16.38■□□□□ 0.21
USP6NL-204ENST00000606752 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
USP6NL-204ENST00000606752 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
USP6NL-204ENST00000606752 CXCL1P09341 107 aa16.37■□□□□ 0.21
USP6NL-204ENST00000606752 FAM231DQ6ZW35 169 aa16.37■□□□□ 0.21
USP6NL-204ENST00000606752 RNF114Q9Y508 228 aa16.37■□□□□ 0.21
USP6NL-204ENST00000606752 V9GYV3 84 aa16.37■□□□□ 0.21
USP6NL-204ENST00000606752 TRBV24-1A0A075B6N3 115 aa16.36■□□□□ 0.21
USP6NL-204ENST00000606752 HAX1O00165 279 aa16.36■□□□□ 0.21
USP6NL-204ENST00000606752 SLURP1P55000 103 aa16.36■□□□□ 0.21
USP6NL-204ENST00000606752 KCNIP4Q6PIL6 250 aa16.36■□□□□ 0.21
USP6NL-204ENST00000606752 TCF24Q7RTU0 167 aa16.36■□□□□ 0.21
USP6NL-204ENST00000606752 CBLN1P23435 193 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 FOXL1Q12952 345 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 PRR27Q6MZM9 219 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 C11orf44Q8N8P7 122 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 FN1P02751 2386 aaKnown RBP16.35■□□□□ 0.21
USP6NL-204ENST00000606752 C2orf70A6NJV1 201 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 SOCS3O14543 225 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 PYGO2Q9BRQ0 406 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 IL36BQ9NZH7 164 aa16.35■□□□□ 0.21
USP6NL-204ENST00000606752 TSSC4Q9Y5U2 329 aaPredicted RBP16.35■□□□□ 0.21
USP6NL-204ENST00000606752 RBAKDNA6NC62 111 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 FOLR2P14207 255 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 HIST2H2BDQ6DRA6 164 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 FAM210BQ96KR6 192 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 DUX3Q96PT4 197 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 CITED2Q99967 270 aaPredicted RBP16.34■□□□□ 0.21
USP6NL-204ENST00000606752 MLXQ9UH92 298 aa16.34■□□□□ 0.21
USP6NL-204ENST00000606752 NSD1Q96L73 2696 aaPredicted RBP16.34■□□□□ 0.21
USP6NL-204ENST00000606752 PRAC2D3DTV9 90 aa16.33■□□□□ 0.21
USP6NL-204ENST00000606752 PROK1P58294 105 aa16.33■□□□□ 0.21
USP6NL-204ENST00000606752 NUDT10Q8NFP7 164 aa16.33■□□□□ 0.21
USP6NL-204ENST00000606752 NUDT11Q96G61 164 aa16.33■□□□□ 0.21
USP6NL-204ENST00000606752 VGLL1Q99990 258 aa16.33■□□□□ 0.21
USP6NL-204ENST00000606752 ZNF705GA8MUZ8 300 aaPredicted RBP16.33■□□□□ 0.2
USP6NL-204ENST00000606752 FAM3BP58499 235 aaPredicted RBP16.33■□□□□ 0.2
USP6NL-204ENST00000606752 ZNF492Q9P255 531 aa16.33■□□□□ 0.2
USP6NL-204ENST00000606752 IGKV3-7A0A075B6H7 116 aa16.32■□□□□ 0.2
USP6NL-204ENST00000606752 A0A1W2PPQ1 181 aa16.32■□□□□ 0.2
USP6NL-204ENST00000606752 SAPCD1Q5SSQ6 148 aa16.32■□□□□ 0.2
USP6NL-204ENST00000606752 SAMD13Q5VXD3 122 aa16.32■□□□□ 0.2
USP6NL-204ENST00000606752 PEMTQ9UBM1 199 aa16.32■□□□□ 0.2
USP6NL-204ENST00000606752 M0QZ24 198 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 GATCO43716 136 aaKnown RBP16.31■□□□□ 0.2
USP6NL-204ENST00000606752 LINC00322Q6ZN03 302 aaPredicted RBP16.31■□□□□ 0.2
USP6NL-204ENST00000606752 C20orf173Q96LM9 149 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 SELENOKQ9Y6D0 94 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 A0A1W2PRX2 142 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 C19orf71A6NCJ1 209 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 RPS10P46783 165 aaKnown RBP16.31■□□□□ 0.2
USP6NL-204ENST00000606752 OR9G4Q8NGQ1 327 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 DLX4Q92988 240 aaPredicted RBP16.31■□□□□ 0.2
USP6NL-204ENST00000606752 DAZAP1Q96EP5 407 aaKnown RBP16.31■□□□□ 0.2
USP6NL-204ENST00000606752 RAX2Q96IS3 184 aa16.31■□□□□ 0.2
USP6NL-204ENST00000606752 ASCL2Q99929 193 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms