RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
SHROOM1-207ENST00000606676 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
SHROOM1-207ENST00000606676 GOLT1BQ9Y3E0 138 aa9.19□□□□□ -0.94
SHROOM1-207ENST00000606676 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 G3V3Q6 166 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 M0R3E3 92 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 RHOBP62745 196 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 BLNKQ8WV28 456 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 OR51M1Q9H341 326 aa9.18□□□□□ -0.94
SHROOM1-207ENST00000606676 RNF222A6NCQ9 220 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 INSP01308 110 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 PRM2P04554 102 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 OR10J4P0C629 311 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 NBEAP1P0C6P0 100 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 Q6ZTC4 211 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 OR2T35Q8NGX2 323 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 PAXXQ9BUH6 204 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
SHROOM1-207ENST00000606676 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 EIF3GO75821 320 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 CT45A10P0DMU9 189 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 ZNF767PQ75MW2 155 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 RPP25LQ8N5L8 163 aaKnown RBP9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 OR10J6PQ8NGY7 276 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 RNF141Q8WVD5 230 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 TNFSF18Q9UNG2 199 aa9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 KLK5Q9Y337 293 aaPredicted RBP9.16□□□□□ -0.94
SHROOM1-207ENST00000606676 LOC102723971A0A1B0GUV8 181 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 TMEM189A5PLL7 270 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 JTBO76095 146 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 HBE1P02100 147 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 M6PRP20645 277 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 CDKN1BP46527 198 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 EMP1P54849 157 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 RAB2AP61019 212 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 ZNF266Q14584 549 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 ICAM4Q14773 271 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 RRN3P1Q2M238 152 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 INO80EQ8NBZ0 244 aaPredicted RBP9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 PPP1R14DQ9NXH3 145 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 DKK2Q9UBU2 259 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 PRELID1Q9Y255 219 aa9.15□□□□□ -0.94
SHROOM1-207ENST00000606676 KMT2AQ03164 3969 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 FXYD6-FXYD2A0A087WZ82 144 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 C11orf94C9JXX5 98 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 OR7C2O60412 319 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 AZU1P20160 251 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 ATP6V0CP27449 155 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 ERCC8Q13216 396 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 HSD17B11Q8NBQ5 300 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 LINC00476Q8WZB0 136 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 ODF3Q96PU9 254 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
SHROOM1-207ENST00000606676 PLAC8L1A1L4L8 177 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 RANP62826 216 aaKnown RBP9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 GFI1BQ5VTD9 330 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 LINC01587Q99440 93 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 PSMG3Q9BT73 122 aaPredicted RBP9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 YTHDF2Q9Y5A9 579 aaKnown RBP9.13□□□□□ -0.95
SHROOM1-207ENST00000606676 IGKV2-40A0A087WW87 121 aaPredicted RBP9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 IGKV2D-40P01614 121 aaPredicted RBP9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 TSPOP30536 169 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 TAS2R45P59539 299 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 TAS2R60P59551 318 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 RPL7L1Q6DKI1 246 aaKnown RBP9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 LINC00477Q96M19 166 aa9.12□□□□□ -0.95
SHROOM1-207ENST00000606676 DEFB131BA0A096LNP1 70 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 LEPP41159 167 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 SERF2P84101 59 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 VGLL1Q99990 258 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
SHROOM1-207ENST00000606676 Q9H3A6 140 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms