RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 THSD7BQ9C0I4 1608 aa4.46□□□□□ -1.69
LSM1P2-201ENST00000604911 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.46□□□□□ -1.69
LSM1P2-201ENST00000604911 CTXND1A0A1B0GTU2 59 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 F6UB75 175 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 INS-IGF2F8WCM5 200 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 H3BMM0 161 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 J3QLW9 94 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 BCE1O60756 84 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 HBDP02042 147 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 PSMB2P49721 201 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 RPL38P63173 70 aaKnown RBP4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 RPL18Q07020 188 aaKnown RBP4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 TMEM155Q4W5P6 130 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 FAM104BQ5XKR9 115 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 RPS27LQ71UM5 84 aaKnown RBP4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 VN1R4Q7Z5H5 301 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 MARCH3Q86UD3 253 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 OR8A1Q8NGG7 326 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 UBE2WQ96B02 151 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 LYZL4Q96KX0 146 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 C11orf1Q9H5F2 150 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 DYNLRB1Q9NP97 96 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 OSTCQ9NRP0 149 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
LSM1P2-201ENST00000604911 DOCK6Q96HP0 2047 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV5-5A0A0J9YX44 114 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 H3BP45 60 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 PIN1P1O15428 100 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 MYCNOSP40205 109 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 RPL34P49207 117 aaKnown RBP4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 SYNJ2BPP57105 145 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF816Q0VGE8 651 aaPredicted RBP4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 FAM222AQ5U5X8 452 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 FRG2Q64ET8 278 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 UNQ9165/PRO28630Q6UXU0 137 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 MORN4Q8NDC4 146 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 TMEM243Q9BU79 118 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 CXCL16Q9H2A7 254 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 MOB4Q9Y3A3 225 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 PLXNA1Q9UIW2 1896 aa4.45□□□□□ -1.7
LSM1P2-201ENST00000604911 VWA8A3KMH1 1905 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 FNDC1Q4ZHG4 1894 aaPredicted RBP4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 A0A0A6YYD4 124 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 TRAV41A0A0B4J266 112 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 MED19A0JLT2 244 aaPredicted RBP4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 C19orf71A6NCJ1 209 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 PRR32B1ATL7 298 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 K7ERJ3 54 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 M0R378 163 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 FFAR1O14842 300 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 NDUFC1O43677 76 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF823P16415 610 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 HBBP68871 147 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 ZFP2Q6ZN57 461 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 DCANP1Q8TF63 244 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 C4orf45Q96LM5 186 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 C17orf77Q96MU5 243 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
LSM1P2-201ENST00000604911 GREB1LQ9C091 1923 aaPredicted RBP4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 SMIM27A0A1W2PRY6 76 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 CRYM-AS1A6NIL9 109 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 C17orf51A8MQB3 221 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 C11orf94C9JXX5 98 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 TIMM17BO60830 172 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF136P52737 540 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 CCL23P55773 120 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 ABCA11PQ4W5N1 156 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 WDR38Q5JTN6 314 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 MIC13Q5XKP0 118 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 LCA10Q71F78 164 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 SFTPA1Q8IWL2 248 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 GVQW1Q8N7I0 195 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 FGFBP3Q8TAT2 258 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 CCL17Q92583 94 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 TOMM6Q96B49 74 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 VSIG2Q96IQ7 327 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 V9GYV3 84 aa4.43□□□□□ -1.7
LSM1P2-201ENST00000604911 EXPH5Q8NEV8 1989 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 TRBV25-1A0A075B6N4 114 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 LOC101059948A0A1B0GTJ6 334 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 H3BVH4 76 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 ZNF73O43830 326 aaPredicted RBP4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 MGST1P10620 155 aaKnown RBP4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 HCFC1P51610 2035 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 PIK3CD-AS1Q5SR53 167 aa4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
LSM1P2-201ENST00000604911 CLEC19AQ6UXS0 136 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms