RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 Q6ZTC4 211 aa8.3□□□□□ -1.08
CCDC12-209ENST00000604164 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
CCDC12-209ENST00000604164 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
CCDC12-209ENST00000604164 FUT9Q9Y231 359 aa8.3□□□□□ -1.08
CCDC12-209ENST00000604164 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 H3BTX0 84 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 CRXO43186 299 aaPredicted RBP8.29□□□□□ -1.08
CCDC12-209ENST00000604164 SNRPCP09234 159 aaKnown RBP8.29□□□□□ -1.08
CCDC12-209ENST00000604164 GIPP09681 153 aaPredicted RBP8.29□□□□□ -1.08
CCDC12-209ENST00000604164 TAS2R60P59551 318 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 OXA1LQ15070 435 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 C12orf74Q32Q52 190 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 ACOT6Q3I5F7 207 aaPredicted RBP8.29□□□□□ -1.08
CCDC12-209ENST00000604164 KHDC3LQ587J8 217 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 FFAR4Q5NUL3 377 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 BAP18Q8IXM2 172 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 BLNKQ8WV28 456 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 LINC01587Q99440 93 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 PAXXQ9BUH6 204 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 SLC25A2Q9BXI2 301 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 SMIM3Q9BZL3 60 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
CCDC12-209ENST00000604164 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 LYRM9A8MSI8 78 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 H7BYZ3 331 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 OR7C2O60412 319 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 NBEAP1P0C6P0 100 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 PYYP10082 97 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 FCN2Q15485 313 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 FAM222AQ5U5X8 452 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 ZNF493Q6ZR52 646 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 MIR17HGQ75NE6 70 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 RPP25LQ8N5L8 163 aaKnown RBP8.28□□□□□ -1.08
CCDC12-209ENST00000604164 INO80EQ8NBZ0 244 aaPredicted RBP8.28□□□□□ -1.08
CCDC12-209ENST00000604164 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 C16orf74Q96GX8 76 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 FAM210BQ96KR6 192 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 AQP10Q96PS8 301 aa8.28□□□□□ -1.08
CCDC12-209ENST00000604164 YTHDF2Q9Y5A9 579 aaKnown RBP8.28□□□□□ -1.08
CCDC12-209ENST00000604164 A0A1W2PPV4 95 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 M6PRP20645 277 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 CSN1S1P47710 185 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 DAD1P61803 113 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 CCDC28AQ8IWP9 274 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 FAM167A-AS1Q96KT0 104 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 NDUFAF3Q9BU61 184 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 CSMD3Q7Z407 3707 aa8.27□□□□□ -1.09
CCDC12-209ENST00000604164 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 ZNF705GA8MUZ8 300 aaPredicted RBP8.26□□□□□ -1.09
CCDC12-209ENST00000604164 NDUFB4O95168 129 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 UBE2L3P68036 154 aaKnown RBP8.26□□□□□ -1.09
CCDC12-209ENST00000604164 ICAM4Q14773 271 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 FAM74A1Q5RGS3 127 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 TMEM78Q5T7P6 136 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 PQLC2Q6ZP29 291 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 STARD9Q9P2P6 4700 aa8.26□□□□□ -1.09
CCDC12-209ENST00000604164 BORCS7-ASMTA0A0B4J1R7 106 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 PRAC2D3DTV9 90 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 MBP02144 154 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 SLC25A5P05141 298 aaKnown RBP8.25□□□□□ -1.09
CCDC12-209ENST00000604164 NMBP08949 121 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 OR10J4P0C629 311 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 HTN1P15515 57 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 ZNF767PQ75MW2 155 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
CCDC12-209ENST00000604164 FXYD5Q96DB9 178 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 WFDC1Q9HC57 220 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CCDC12-209ENST00000604164 TIMM8BQ9Y5J9 83 aaPredicted RBP8.25□□□□□ -1.09
CCDC12-209ENST00000604164 TRBV7-9A0A0J9YWB2 115 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 RBAKDNA6NC62 111 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 M0R3E3 92 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 SERF2P84101 59 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 GFI1BQ5VTD9 330 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 FAM122CQ6P4D5 195 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 OR2T35Q8NGX2 323 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 OR2G3Q8NGZ4 309 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 PYGO2Q9BRQ0 406 aa8.24□□□□□ -1.09
CCDC12-209ENST00000604164 PSMG3Q9BT73 122 aaPredicted RBP8.24□□□□□ -1.09
CCDC12-209ENST00000604164 FXYD6-FXYD2A0A087WZ82 144 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 C7orf71A4D174 169 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 P0DMU3 169 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 RANP62826 216 aaKnown RBP8.23□□□□□ -1.09
CCDC12-209ENST00000604164 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
CCDC12-209ENST00000604164 CMTM2Q8TAZ6 248 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms