RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 IGLV3-19P01714 112 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 C5orf64Q2M2E5 130 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 HGFACQ04756 655 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 TMEM200BQ69YZ2 307 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 SPXQ9BT56 116 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 RPL35AP18077 110 aaKnown RBP7.85□□□□□ -1.15
CSMD1-217ENST00000602723 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
CSMD1-217ENST00000602723 Q86TA4 180 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 LINC00477Q96M19 166 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 NUP210LQ5VU65 1888 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 A8MWP6 167 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 H0YJW9 148 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 STPG4Q8N801 248 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 FGFBP3Q8TAT2 258 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 MRAPQ8TCY5 172 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 PLSCR4Q9NRQ2 329 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 LY6G5BQ8NDX9 201 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 PPDPFLQ8WWR9 84 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 RFNGQ9Y644 331 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 C9orf139Q6ZV77 190 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 NEGR1Q7Z3B1 354 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 CITED1Q99966 193 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 GAS1P54826 345 aa7.85□□□□□ -1.15
CSMD1-217ENST00000602723 LINC00527Q9UJ94 153 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF114Q8NC26 417 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 NTF4P34130 210 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 LTBRP36941 435 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 EREGO14944 169 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 FOXF2Q12947 444 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 SS18Q15532 418 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 USMG5Q96IX5 58 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 MCRIP2Q9BUT9 160 aaKnown RBP7.84□□□□□ -1.15
CSMD1-217ENST00000602723 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 F8P00451 2351 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 TLN1Q9Y490 2541 aaKnown RBP7.84□□□□□ -1.15
CSMD1-217ENST00000602723 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-217ENST00000602723 PDE6HQ13956 83 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 CT83Q5H943 113 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 FAM231BA6NCW3 169 aa7.84□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV3-53P01767 116 aa7.84□□□□□ -1.16
CSMD1-217ENST00000602723 RBMY1FQ15415 496 aaKnown RBP7.84□□□□□ -1.16
CSMD1-217ENST00000602723 CSRP2Q16527 193 aa7.84□□□□□ -1.16
CSMD1-217ENST00000602723 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 PSCAO43653 123 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 MRPL14Q6P1L8 145 aaKnown RBP7.83□□□□□ -1.16
CSMD1-217ENST00000602723 GGNQ86UU5 652 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 ATG2AQ2TAZ0 1938 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 POLR3KQ9Y2Y1 108 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-217ENST00000602723 MINOS1-NBL1R4GNA1 71 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 PIEZO1Q92508 2521 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 KLRD1Q13241 179 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 C15orf62A8K5M9 175 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 LYL1P12980 280 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 LINC00473A8K010 186 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 PRSS57Q6UWY2 283 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 TMEM178BH3BS89 294 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 PSPNO60542 156 aa7.83□□□□□ -1.16
CSMD1-217ENST00000602723 EXPH5Q8NEV8 1989 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 SOCS3O14543 225 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 TMEM75Q8N9X5 138 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 TCF15Q12870 199 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 A0A1B0GUS0 222 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 FAM223BA6NKX1 122 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 IFITM1P13164 125 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 CFHR2P36980 270 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 FAM223AQ8IWN6 122 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 RNF5Q99942 180 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 PINLYPA6NC86 204 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 TRBV6-6A0A0A6YYG2 114 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 ACANP16112 2415 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 CD177Q8N6Q3 437 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 METRNQ9UJH8 293 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 FNDC10F2Z333 226 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 FLVCR1-AS1Q8TAF5 88 aa7.82□□□□□ -1.16
CSMD1-217ENST00000602723 Q0VG73 95 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 C1QTNF4Q9BXJ3 329 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 ADCYAP1P18509 176 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 PKD1L2Q7Z442 2459 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 LOC102723996A0A087X1L8 192 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 BUB1B-PAK6H3BSN5 160 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 PIP4P2Q8N4L2 257 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 MST1P26927 711 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 LIME1Q9H400 295 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 F8W1H4 67 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 ARMS2P0C7Q2 107 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 TRPT1Q86TN4 253 aaKnown RBP7.81□□□□□ -1.16
CSMD1-217ENST00000602723 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
CSMD1-217ENST00000602723 PNRC2Q9NPJ4 139 aaKnown RBP7.81□□□□□ -1.16
CSMD1-217ENST00000602723 DSCR9P59020 149 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms