RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
SSBP4-213ENST00000602088 MRPL53Q96EL3 112 aaKnown RBP12.03□□□□□ -0.48
SSBP4-213ENST00000602088 PAXXQ9BUH6 204 aa12.03□□□□□ -0.48
SSBP4-213ENST00000602088 PPP1R14DQ9NXH3 145 aa12.03□□□□□ -0.48
SSBP4-213ENST00000602088 RNF222A6NCQ9 220 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 M0R3E3 92 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 INSP01308 110 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 ZNF266Q14584 549 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 BAP18Q8IXM2 172 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 RNF141Q8WVD5 230 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 FXYD5Q96DB9 178 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 ZNF503Q96F45 646 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 LYSTQ99698 3801 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 TNFSF18Q9UNG2 199 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 PRELID1Q9Y255 219 aa12.02□□□□□ -0.49
SSBP4-213ENST00000602088 KLK5Q9Y337 293 aaPredicted RBP12.02□□□□□ -0.49
SSBP4-213ENST00000602088 PLECQ15149 4684 aaKnown RBP12.02□□□□□ -0.49
SSBP4-213ENST00000602088 TRAV12-2A0A075B6T6 113 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 FXYD6-FXYD2A0A087WZ82 144 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 TMEM189A5PLL7 270 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 NPIPB6E9PJ23 425 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 G3V3Q6 166 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 OR7C2O60412 319 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 HBE1P02100 147 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 OR10J4P0C629 311 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 M6PRP20645 277 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 CDKN1BP46527 198 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 ACOT6Q3I5F7 207 aaPredicted RBP12.01□□□□□ -0.49
SSBP4-213ENST00000602088 EXOC3-AS1Q8N2X6 119 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 TMEM208Q9BTX3 173 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
SSBP4-213ENST00000602088 JTBO76095 146 aa12□□□□□ -0.49
SSBP4-213ENST00000602088 RRN3P1Q2M238 152 aa12□□□□□ -0.49
SSBP4-213ENST00000602088 HSD17B11Q8NBQ5 300 aa12□□□□□ -0.49
SSBP4-213ENST00000602088 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
SSBP4-213ENST00000602088 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 TAS2R45P59539 299 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 RAB2AP61019 212 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 ICAM4Q14773 271 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 RPP25LQ8N5L8 163 aaKnown RBP11.99□□□□□ -0.49
SSBP4-213ENST00000602088 OR2G3Q8NGZ4 309 aa11.99□□□□□ -0.49
SSBP4-213ENST00000602088 C11orf94C9JXX5 98 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 SPART-AS1P0CW21 52 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 ATP6V0CP27449 155 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 TSPOP30536 169 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 EMP1P54849 157 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 KIR3DS1Q14943 382 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 Q6ZTC4 211 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 TMEM256Q8N2U0 113 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 OR10G9Q8NGN4 311 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 OR10G7Q8NGN6 311 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 PHYHIPLQ96FC7 376 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
SSBP4-213ENST00000602088 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
SSBP4-213ENST00000602088 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
SSBP4-213ENST00000602088 ZNF705GA8MUZ8 300 aaPredicted RBP11.97□□□□□ -0.49
SSBP4-213ENST00000602088 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
SSBP4-213ENST00000602088 PRM2P04554 102 aa11.97□□□□□ -0.49
SSBP4-213ENST00000602088 UBE2L3P68036 154 aaKnown RBP11.97□□□□□ -0.49
SSBP4-213ENST00000602088 FAM122CQ6P4D5 195 aa11.97□□□□□ -0.49
SSBP4-213ENST00000602088 LYPD1Q8N2G4 141 aa11.97□□□□□ -0.49
SSBP4-213ENST00000602088 RYR2Q92736 4967 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 TRAV10A0A0B4J240 114 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 LEPP41159 167 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 RANP62826 216 aaKnown RBP11.96□□□□□ -0.49
SSBP4-213ENST00000602088 SERF2P84101 59 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 ERCC8Q13216 396 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 RPL7L1Q6DKI1 246 aaKnown RBP11.96□□□□□ -0.49
SSBP4-213ENST00000602088 ZNF767PQ75MW2 155 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 C2CD4CQ8TF44 421 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 LINC00477Q96M19 166 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 LINC01587Q99440 93 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 C20orf144Q9BQM9 153 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 DKK2Q9UBU2 259 aa11.96□□□□□ -0.49
SSBP4-213ENST00000602088 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.49
SSBP4-213ENST00000602088 TEX48A0A1B0GUV7 120 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 SMLR1H3BR10 107 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 AZU1P20160 251 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 TAS2R60P59551 318 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 PQLC2Q6ZP29 291 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 DNAH1Q9P2D7 4330 aa11.95□□□□□ -0.5
SSBP4-213ENST00000602088 IGKV2-40A0A087WW87 121 aaPredicted RBP11.94□□□□□ -0.5
SSBP4-213ENST00000602088 BORCS7-ASMTA0A0B4J1R7 106 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 H7BYZ3 331 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 ARPC5O15511 151 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
SSBP4-213ENST00000602088 MBP02144 154 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 FAM222AQ5U5X8 452 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 GNPNAT1Q96EK6 184 aaPredicted RBP11.94□□□□□ -0.5
SSBP4-213ENST00000602088 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
SSBP4-213ENST00000602088 Q9H3A6 140 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms