RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	OR4B1	Q8NGF8	309 aa		6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	FXYD5	Q96DB9	178 aa		6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	ODF3	Q96PU9	254 aa		6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	MRPL32	Q9BYC8	188 aa	Known RBP	6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	TIMM9	Q9Y5J7	89 aa		6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	RFNG	Q9Y644	331 aa		6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	EPPK1	P58107	5090 aa	Known RBP	6.29	□□□□□ -1.4
SSBP4-208	ENST00000600628	PLAC8L1	A1L4L8	177 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	TMEM189	A5PLL7	270 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628		M0R2Z0	102 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	SNRPC	P09234	159 aa	Known RBP	6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	PYY	P10082	97 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	FXYD7	P58549	80 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	FGL1	Q08830	312 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	C12orf74	Q32Q52	190 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	MIR17HG	Q75NE6	70 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	OR2G3	Q8NGZ4	309 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	LINC00476	Q8WZB0	136 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	TNFSF18	Q9UNG2	199 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	FUT9	Q9Y231	359 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	HECTD4	Q9Y4D8	3996 aa		6.28	□□□□□ -1.4
SSBP4-208	ENST00000600628	C11orf94	C9JXX5	98 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	C17orf112	F2Z3M2	114 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628		H3BTX0	84 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628		M0R3E3	92 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	NBEAP1	P0C6P0	100 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	KIR3DS1	Q14943	382 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	SPINK13	Q1W4C9	94 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	C9orf47	Q6ZRZ4	202 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF738	Q8NE65	137 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	SUN5	Q8TC36	379 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	C20orf144	Q9BQM9	153 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	PSMG3	Q9BT73	122 aa	Predicted RBP	6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	PPP1R14D	Q9NXH3	145 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	DKK2	Q9UBU2	259 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	PRELID1	Q9Y255	219 aa		6.27	□□□□□ -1.41
SSBP4-208	ENST00000600628	KLLN	B2CW77	178 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	LY6G6C	O95867	125 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	IFNA5	P01569	189 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	CT45A10	P0DMU9	189 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	CRISP2	P16562	243 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	M6PR	P20645	277 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	CDKN1B	P46527	198 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	TCTA	P57738	103 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	HIST1H1A	Q02539	215 aa	Predicted RBP	6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	FFAR4	Q5NUL3	377 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628		Q6ZTC4	211 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	BAP18	Q8IXM2	172 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	LYPD1	Q8N2G4	141 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	TMEM256	Q8N2U0	113 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	RPP25L	Q8N5L8	163 aa	Known RBP	6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	ARL6IP6	Q8N6S5	226 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	LRRC20	Q8TCA0	184 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	C2CD4C	Q8TF44	421 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	RNF141	Q8WVD5	230 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	SMIM3	Q9BZL3	60 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR51M1	Q9H341	326 aa		6.26	□□□□□ -1.41
SSBP4-208	ENST00000600628	TRBV7-9	A0A0J9YWB2	115 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF324	O75467	553 aa	Predicted RBP	6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	INS	P01308	110 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	PRM2	P04554	102 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	NMB	P08949	121 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	AZU1	P20160	251 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	RHOB	P62745	196 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	SERF2	P84101	59 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZNF266	Q14584	549 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	EXOC3-AS1	Q8N2X6	119 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	LINC00612	Q8N6U2	182 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR2T35	Q8NGX2	323 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	RNASE8	Q8TDE3	154 aa	Known RBP	6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	PHYHIPL	Q96FC7	376 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	LINC00467	Q9BRT7	94 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	PAXX	Q9BUH6	204 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	AGPAT4-IT1	Q9H0P7	198 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	APLN	Q9ULZ1	77 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	GOLT1B	Q9Y3E0	138 aa		6.25	□□□□□ -1.41
SSBP4-208	ENST00000600628	TRAV12-2	A0A075B6T6	113 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	IGHV3OR16-12	A0A075B7B8	117 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	LOC102723971	A0A1B0GUV8	181 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	RBAKDN	A6NC62	111 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	HBE1	P02100	147 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	SLC25A5	P05141	298 aa	Known RBP	6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	STAG3L2	P0CL84	134 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	STAG3L3	P0CL85	134 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	PRB4	P10163	310 aa	Predicted RBP	6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	ATP6V0C	P27449	155 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	TAS2R60	P59551	318 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	NDUFA5	Q16718	116 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	RRN3P1	Q2M238	152 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	GFI1B	Q5VTD9	330 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	LGALS9C	Q6DKI2	356 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	PQLC2	Q6ZP29	291 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	ZFAND2A	Q8N6M9	145 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	OR10J6P	Q8NGY7	276 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	SCGB1C1	Q8TD33	95 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	LINC00477	Q96M19	166 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	CYTL1	Q9NRR1	136 aa		6.24	□□□□□ -1.41
SSBP4-208	ENST00000600628	TRAV10	A0A0B4J240	114 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	TEX48	A0A1B0GUV7	120 aa		6.23	□□□□□ -1.41
SSBP4-208	ENST00000600628	IGLL5	B9A064	214 aa		6.23	□□□□□ -1.41

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