RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 TMEM208Q9BTX3 173 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 SH3BGRL3Q9H299 93 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 CXorf1O96002 111 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 C1QBP02746 253 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
SRRM1-223ENST00000600523 ICAM4Q14773 271 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 EIF5AL1Q6IS14 154 aaKnown RBP9.51□□□□□ -0.89
SRRM1-223ENST00000600523 OR11H4Q8NGC9 324 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 CMTM2Q8TAZ6 248 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
SRRM1-223ENST00000600523 ZNF705FA8MVS1 300 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-223ENST00000600523 UMAD1C9J7I0 102 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 BOLA2-SMG1P6H3BVE0 249 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 ZNF705DP0CH99 300 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-223ENST00000600523 ZNF705BP0CI00 300 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-223ENST00000600523 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
SRRM1-223ENST00000600523 MIFP14174 115 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 FXYD7P58549 80 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 TMUB2Q71RG4 321 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 IQCF2Q8IXL9 164 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 EXOC3-AS1Q8N2X6 119 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
SRRM1-223ENST00000600523 SLC35B3Q9H1N7 401 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 TMEM167BQ9NRX6 74 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
SRRM1-223ENST00000600523 IGHV3OR16-12A0A075B7B8 117 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 HMGB3O15347 200 aaKnown RBP9.49□□□□□ -0.89
SRRM1-223ENST00000600523 NDUFB4O95168 129 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 INSP01308 110 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 STAG3L2P0CL84 134 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 STAG3L3P0CL85 134 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 STOML3Q8TAV4 291 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 IGF2BP2-AS1Q96M15 143 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 Q9H3A6 140 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 CYTL1Q9NRR1 136 aa9.49□□□□□ -0.89
SRRM1-223ENST00000600523 A0A0J9YWU9 116 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 SMIM9A6NGZ8 99 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 A8MTW9 85 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 M0R3E3 92 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 GIG44P09565 113 aaPredicted RBP9.48□□□□□ -0.89
SRRM1-223ENST00000600523 LEPP41159 167 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 CDKN1BP46527 198 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 TMEM78Q5T7P6 136 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 PHYHIPLQ96FC7 376 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
SRRM1-223ENST00000600523 ZNF705EA8MWA4 302 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-223ENST00000600523 PRAC2D3DTV9 90 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 M0R2Z0 102 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 HBE1P02100 147 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 GCHFRP30047 84 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 AMTNQ6UX39 209 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 BAP18Q8IXM2 172 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 TMEM256Q8N2U0 113 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 CSNK1G2-AS1Q8NCQ2 148 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 ODF3Q96PU9 254 aa9.47□□□□□ -0.89
SRRM1-223ENST00000600523 C11orf68Q9H3H3 251 aaKnown RBP9.47□□□□□ -0.89
SRRM1-223ENST00000600523 AGRNO00468 2067 aa9.46□□□□□ -0.89
SRRM1-223ENST00000600523 TMEM189A5PLL7 270 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 PGPA6NDG6 321 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 NPIPB6E9PJ23 425 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 K7EQM0 130 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 NEU1Q99519 415 aa9.46□□□□□ -0.9
SRRM1-223ENST00000600523 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 TEX46H3BTG2 121 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
SRRM1-223ENST00000600523 RRN3P1Q2M238 152 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 LGALSLQ3ZCW2 172 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-223ENST00000600523 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-223ENST00000600523 C9orf47Q6ZRZ4 202 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 LINC01587Q99440 93 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 NKX6-2Q9C056 277 aaPredicted RBP9.45□□□□□ -0.9
SRRM1-223ENST00000600523 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
SRRM1-223ENST00000600523 NBEAL2Q6ZNJ1 2754 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 TRAV12-2A0A075B6T6 113 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 IGHV4-28A0A0C4DH34 117 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 SERTM2A0A1B0GWG4 89 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
SRRM1-223ENST00000600523 RAB5CP51148 216 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 C11orf45Q8TAV5 145 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 TMED6Q8WW62 240 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 NIPSNAP3BQ9BS92 247 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms