RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 RPP25LQ8N5L8 163 aaKnown RBP10.07□□□□□ -0.8
SNRPA-208ENST00000600456 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 BLNKQ8WV28 456 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF503Q96F45 646 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 RARRES2Q99969 163 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 ACTR3CQ9C0K3 210 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-208ENST00000600456 C1QBP02746 253 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 EIF5AP63241 154 aaKnown RBP10.06□□□□□ -0.8
SNRPA-208ENST00000600456 OR10J6PQ8NGY7 276 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 SLC35B3Q9H1N7 401 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 AGRNO00468 2067 aa10.06□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF705FA8MVS1 300 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF705EA8MWA4 302 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-208ENST00000600456 BOLA2-SMG1P6H3BVE0 249 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 PFDN1O60925 122 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF705DP0CH99 300 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF705BP0CI00 300 aaPredicted RBP10.05□□□□□ -0.8
SNRPA-208ENST00000600456 STAG3L2P0CL84 134 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 STAG3L3P0CL85 134 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 AKR1C8PQ5T2L2 129 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 PHYHIPLQ96FC7 376 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
SNRPA-208ENST00000600456 PRAC2D3DTV9 90 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 NPIPB6E9PJ23 425 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 M0R3E3 92 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 ICAM4Q14773 271 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 IL17DQ8TAD2 202 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF471Q9BX82 626 aaPredicted RBP10.04□□□□□ -0.8
SNRPA-208ENST00000600456 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
SNRPA-208ENST00000600456 CXorf1O96002 111 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 ARL14EPLP0DKL9 152 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 MIFP14174 115 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 TSPOP30536 169 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 FXYD7P58549 80 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 RANP62826 216 aaKnown RBP10.03□□□□□ -0.8
SNRPA-208ENST00000600456 ZNF705AQ6ZN79 300 aaPredicted RBP10.03□□□□□ -0.8
SNRPA-208ENST00000600456 MUC7Q8TAX7 377 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 NEU1Q99519 415 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 Q9H3A6 140 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 GOLT1BQ9Y3E0 138 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 X6R8D5 127 aa10.03□□□□□ -0.8
SNRPA-208ENST00000600456 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 CTXND1A0A1B0GTU2 59 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 M0R2Z0 102 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 HMGB3O15347 200 aaKnown RBP10.02□□□□□ -0.81
SNRPA-208ENST00000600456 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
SNRPA-208ENST00000600456 INSP01308 110 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
SNRPA-208ENST00000600456 GCHFRP30047 84 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 CSN1S1P47710 185 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 SPINK13Q1W4C9 94 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 BAP18Q8IXM2 172 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 TMEM167BQ9NRX6 74 aa10.02□□□□□ -0.81
SNRPA-208ENST00000600456 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
SNRPA-208ENST00000600456 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
SNRPA-208ENST00000600456 CDKN1BP46527 198 aa10.01□□□□□ -0.81
SNRPA-208ENST00000600456 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
SNRPA-208ENST00000600456 Q8NAQ8 132 aa10.01□□□□□ -0.81
SNRPA-208ENST00000600456 LINC00477Q96M19 166 aa10.01□□□□□ -0.81
SNRPA-208ENST00000600456 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 A0A1B0GVG6 124 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 RBAKDNA6NC62 111 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 CRXO43186 299 aaPredicted RBP10□□□□□ -0.81
SNRPA-208ENST00000600456 CT45A10P0DMU9 189 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 LEPP41159 167 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 ZNF726P1Q15940 193 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 ZFP69Q49AA0 526 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
SNRPA-208ENST00000600456 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
SNRPA-208ENST00000600456 PGPA6NDG6 321 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
SNRPA-208ENST00000600456 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
SNRPA-208ENST00000600456 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 DPPA3Q6W0C5 159 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 SSX7Q7RTT5 188 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 C1orf158Q8N1D5 194 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 TMEM256Q8N2U0 113 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 CMTM2Q8TAZ6 248 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 TMEM208Q9BTX3 173 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 AGPAT4-IT1Q9H0P7 198 aa9.99□□□□□ -0.81
SNRPA-208ENST00000600456 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
SNRPA-208ENST00000600456 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
SNRPA-208ENST00000600456 TRBV7-9A0A0J9YWB2 115 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms