RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 PRSS46E5RG02 174 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 HBE1P02100 147 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 CAMLGP49069 296 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 DLK1P80370 383 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 SERF2P84101 59 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
HIF3A-217ENST00000600236 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 S100A7AQ86SG5 101 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 OR1B1Q8NGR6 318 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 FAM210BQ96KR6 192 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 UQCC1Q9NVA1 299 aa8.21□□□□□ -1.1
HIF3A-217ENST00000600236 IGKV1OR2-108A0A075B7D4 117 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 TRAV1-1A0A0B4J248 108 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 ZNF98A6NK75 572 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 FNDC10F2Z333 226 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 ORM2P19652 201 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 RRN3P1Q2M238 152 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 ZNF709Q8N972 641 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 TMEM208Q9BTX3 173 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 DOK5Q9P104 306 aa8.2□□□□□ -1.1
HIF3A-217ENST00000600236 A0A0J9YX75 114 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 UBE2L5PA0A1B0GUS4 154 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 SMCO3A2RU48 225 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 DUSP14O95147 198 aaKnown RBP8.19□□□□□ -1.1
HIF3A-217ENST00000600236 DEFB1P60022 68 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 AKR1C8PQ5T2L2 129 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 UBE2DNLQ8IWF7 75 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 FAM213BQ8TBF2 198 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 SLC35B3Q9H1N7 401 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 DKK2Q9UBU2 259 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 RNF24Q9Y225 148 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 WDR83OSQ9Y284 106 aa8.19□□□□□ -1.1
HIF3A-217ENST00000600236 LOC102723971A0A1B0GUV8 181 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 TMEM218A2RU14 115 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 F6UB75 175 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 MPDU1O75352 247 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
HIF3A-217ENST00000600236 C10orf91Q5T1B1 145 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 FAM222AQ5U5X8 452 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
HIF3A-217ENST00000600236 INSP01308 110 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 FGF7P21781 194 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 GATA2P23769 480 aaPredicted RBP8.17□□□□□ -1.1
HIF3A-217ENST00000600236 FHITP49789 147 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 B2MP61769 119 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 SELENOTP62341 195 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 IGF2BP2-AS1Q96M15 143 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 SMDT1Q9H4I9 107 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
HIF3A-217ENST00000600236 CARHSP1Q9Y2V2 147 aaKnown RBP8.17□□□□□ -1.1
HIF3A-217ENST00000600236 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
HIF3A-217ENST00000600236 C17orf112F2Z3M2 114 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 H3BRN7 92 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 MBP02144 154 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 H2AFB1P0C5Y9 115 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 LINC00869P0C866 280 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 HTN3P15516 51 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
HIF3A-217ENST00000600236 DAD1P61803 113 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 C20orf173Q96LM9 149 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 SHANK2-AS3Q9BTD1 123 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 NPCDR1Q9BY65 106 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 SLC25A39Q9BZJ4 359 aaPredicted RBP8.16□□□□□ -1.1
HIF3A-217ENST00000600236 KCNIP2Q9NS61 270 aa8.16□□□□□ -1.1
HIF3A-217ENST00000600236 AGRNO00468 2067 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 A8MTW9 85 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 HYPMO75409 117 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 OR5G3P0C626 314 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 RAB2AP61019 212 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
HIF3A-217ENST00000600236 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 ZNF738Q8NE65 137 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 SEC11CQ9BY50 192 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 PPP1R14DQ9NXH3 145 aa8.15□□□□□ -1.1
HIF3A-217ENST00000600236 KMT2AQ03164 3969 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
HIF3A-217ENST00000600236 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 PLP1P60201 277 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 PEA15Q15121 130 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 GUK1Q16774 197 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 SPINK13Q1W4C9 94 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 RNF212Q495C1 297 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 SOHLH1Q5JUK2 328 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
HIF3A-217ENST00000600236 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms