RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 KCNRGQ8N5I3 272 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 ZNF503Q96F45 646 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 PAXXQ9BUH6 204 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
LIG1-219ENST00000600055 M0R3E3 92 aa11□□□□□ -0.65
LIG1-219ENST00000600055 OR7C2O60412 319 aa11□□□□□ -0.65
LIG1-219ENST00000600055 ZNF253O75346 499 aa11□□□□□ -0.65
LIG1-219ENST00000600055 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
LIG1-219ENST00000600055 M6PRP20645 277 aa11□□□□□ -0.65
LIG1-219ENST00000600055 RHOBP62745 196 aa11□□□□□ -0.65
LIG1-219ENST00000600055 ACOT6Q3I5F7 207 aaPredicted RBP11□□□□□ -0.65
LIG1-219ENST00000600055 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
LIG1-219ENST00000600055 ZNF705AQ6ZN79 300 aaPredicted RBP11□□□□□ -0.65
LIG1-219ENST00000600055 C1orf158Q8N1D5 194 aa11□□□□□ -0.65
LIG1-219ENST00000600055 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
LIG1-219ENST00000600055 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
LIG1-219ENST00000600055 RNF141Q8WVD5 230 aa11□□□□□ -0.65
LIG1-219ENST00000600055 ARPC5LQ9BPX5 153 aa11□□□□□ -0.65
LIG1-219ENST00000600055 SH3BGRL3Q9H299 93 aa11□□□□□ -0.65
LIG1-219ENST00000600055 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
LIG1-219ENST00000600055 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 CRXO43186 299 aaPredicted RBP10.99□□□□□ -0.65
LIG1-219ENST00000600055 MIFP14174 115 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 PDE6HQ13956 83 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 OR10G4Q8NGN3 311 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 OR10G9Q8NGN4 311 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 OR10G7Q8NGN6 311 aa10.99□□□□□ -0.65
LIG1-219ENST00000600055 GNPNAT1Q96EK6 184 aaPredicted RBP10.99□□□□□ -0.65
LIG1-219ENST00000600055 TRAV12-2A0A075B6T6 113 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 BOLA2-SMG1P6H3BVE0 249 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
LIG1-219ENST00000600055 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
LIG1-219ENST00000600055 ICAM4Q14773 271 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 BAP18Q8IXM2 172 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 IGF2BP2-AS1Q96M15 143 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 PSMG3Q9BT73 122 aaPredicted RBP10.98□□□□□ -0.65
LIG1-219ENST00000600055 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
LIG1-219ENST00000600055 A0A1W2PPV4 95 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 CXorf65A6NEN9 183 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 TAS2R45P59539 299 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 UBE2L3P68036 154 aaKnown RBP10.97□□□□□ -0.65
LIG1-219ENST00000600055 ERCC8Q13216 396 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 TMUB2Q71RG4 321 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
LIG1-219ENST00000600055 BCL2L11O43521 198 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 AMBPP02760 352 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 PRM2P04554 102 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 KIR3DS1Q14943 382 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 EIF5AL1Q6IS14 154 aaKnown RBP10.96□□□□□ -0.65
LIG1-219ENST00000600055 RPP25LQ8N5L8 163 aaKnown RBP10.96□□□□□ -0.65
LIG1-219ENST00000600055 C11orf45Q8TAV5 145 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 MRPL53Q96EL3 112 aaKnown RBP10.96□□□□□ -0.65
LIG1-219ENST00000600055 NEU1Q99519 415 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 CYTL1Q9NRR1 136 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 PRELID1Q9Y255 219 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 CSMD3Q7Z407 3707 aa10.96□□□□□ -0.65
LIG1-219ENST00000600055 NPIPB6E9PJ23 425 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 INSP01308 110 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 MBP02144 154 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 CDC34P49427 236 aaPredicted RBP10.95□□□□□ -0.66
LIG1-219ENST00000600055 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
LIG1-219ENST00000600055 SERF2P84101 59 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 ZNF471Q9BX82 626 aaPredicted RBP10.95□□□□□ -0.66
LIG1-219ENST00000600055 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
LIG1-219ENST00000600055 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
LIG1-219ENST00000600055 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
LIG1-219ENST00000600055 CD300CQ08708 224 aa10.94□□□□□ -0.66
LIG1-219ENST00000600055 LGALSLQ3ZCW2 172 aaPredicted RBP10.94□□□□□ -0.66
LIG1-219ENST00000600055 RAB24Q969Q5 203 aa10.94□□□□□ -0.66
LIG1-219ENST00000600055 TMEM208Q9BTX3 173 aa10.94□□□□□ -0.66
LIG1-219ENST00000600055 Q9H3A6 140 aa10.94□□□□□ -0.66
LIG1-219ENST00000600055 KMT2CQ8NEZ4 4911 aaKnown RBP10.94□□□□□ -0.66
LIG1-219ENST00000600055 SMIM9A6NGZ8 99 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 ZNF705GA8MUZ8 300 aaPredicted RBP10.93□□□□□ -0.66
LIG1-219ENST00000600055 J3KRW8 73 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 TPT1P13693 172 aaKnown RBP10.93□□□□□ -0.66
LIG1-219ENST00000600055 CDKN1BP46527 198 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 EMP1P54849 157 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 PQLC2Q6ZP29 291 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 SLC51BQ86UW2 128 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
LIG1-219ENST00000600055 AGPAT4-IT1Q9H0P7 198 aa10.93□□□□□ -0.66
LIG1-219ENST00000600055 HBE1P02100 147 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 STAG3L2P0CL84 134 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 STAG3L3P0CL85 134 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 ARL14EPLP0DKL9 152 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 CEMP1Q6PRD7 247 aaPredicted RBP10.92□□□□□ -0.66
LIG1-219ENST00000600055 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 VGLL1Q99990 258 aa10.92□□□□□ -0.66
LIG1-219ENST00000600055 LOC102723971A0A1B0GUV8 181 aa10.91□□□□□ -0.66
LIG1-219ENST00000600055 TSPOP30536 169 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms