RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 DEFB135Q30KP9 77 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 ZNF680Q8NEM1 530 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 SAT2Q96F10 170 aaPredicted RBP9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
SH2D3A-208ENST00000599563 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 ZNF705EA8MWA4 302 aaPredicted RBP9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 HRH4Q9H3N8 390 aa9.42□□□□□ -0.9
SH2D3A-208ENST00000599563 CXorf1O96002 111 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 RAB5CP51148 216 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 CCL20P78556 96 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 SFT2D1Q8WV19 159 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 ZNF331Q9NQX6 463 aaPredicted RBP9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
SH2D3A-208ENST00000599563 MEOX2P50222 304 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 DEFB131AP59861 70 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 UBE2G2P60604 165 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 PSMG4Q5JS54 123 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 STHQ8IWL8 128 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 SUN5Q8TC36 379 aa9.4□□□□□ -0.9
SH2D3A-208ENST00000599563 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.91
SH2D3A-208ENST00000599563 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 M0R3E3 92 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 PSMB3P49720 205 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 Q9H3A6 140 aa9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
SH2D3A-208ENST00000599563 CXorf65A6NEN9 183 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 PRAC2D3DTV9 90 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 F6UB75 175 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 ISLRO14498 428 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF253O75346 499 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 IFNA7P01567 189 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 PDE6HQ13956 83 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 ICAM4Q14773 271 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 GUK1Q16774 197 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 RARRES2Q99969 163 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 TMEM167BQ9NRX6 74 aa9.38□□□□□ -0.91
SH2D3A-208ENST00000599563 KNCNA6PVL3 124 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 CA1P00915 261 aaPredicted RBP9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 NMBP08949 121 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 ATP5G3P48201 142 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 GNG5P63218 68 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 PSG3Q16557 428 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 SAMD13Q5VXD3 122 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 RYR3Q15413 4870 aa9.37□□□□□ -0.91
SH2D3A-208ENST00000599563 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 FAM74A7A6NL05 159 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 PAGE4O60829 102 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 HBE1P02100 147 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 ID1P41134 155 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 BLOC1S1P78537 153 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF738Q8NE65 137 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 OR11H2Q8NH07 326 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 LYPD6BQ8NI32 183 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 RPH3ALQ9UNE2 315 aa9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 KLK5Q9Y337 293 aaPredicted RBP9.36□□□□□ -0.91
SH2D3A-208ENST00000599563 PGPA6NDG6 321 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 PSG9Q00887 426 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 OTORQ9NRC9 128 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 GNG13Q9P2W3 67 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 LYSTQ99698 3801 aa9.35□□□□□ -0.91
SH2D3A-208ENST00000599563 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 ZNF767PQ75MW2 155 aa9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 RPUSD4Q96CM3 377 aaKnown RBP9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 SAV1Q9H4B6 383 aaPredicted RBP9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
SH2D3A-208ENST00000599563 A0A0J9YX75 114 aa9.33□□□□□ -0.92
SH2D3A-208ENST00000599563 SLC25A5P05141 298 aaKnown RBP9.33□□□□□ -0.92
SH2D3A-208ENST00000599563 ERCC8Q13216 396 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms