RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PARD6GQ9BYG4 376 aaPredicted RBP14.62□□□□□ -0.07
PNKP-212ENST00000599454 PRAC2D3DTV9 90 aa14.61□□□□□ -0.07
PNKP-212ENST00000599454 SLC17A3O00476 420 aa14.61□□□□□ -0.07
PNKP-212ENST00000599454 SCGB1D2O95969 90 aa14.61□□□□□ -0.07
PNKP-212ENST00000599454 IGLC2P0DOY2 106 aa14.61□□□□□ -0.07
PNKP-212ENST00000599454 C10orf113Q5VZT2 155 aa14.61□□□□□ -0.07
PNKP-212ENST00000599454 SNRPCP09234 159 aaKnown RBP14.6□□□□□ -0.07
PNKP-212ENST00000599454 OR4E1P0C645 316 aa14.6□□□□□ -0.07
PNKP-212ENST00000599454 GUK1Q16774 197 aa14.6□□□□□ -0.07
PNKP-212ENST00000599454 IAH1Q2TAA2 248 aaPredicted RBP14.6□□□□□ -0.07
PNKP-212ENST00000599454 ZBTB8BQ8NAP8 495 aaPredicted RBP14.6□□□□□ -0.07
PNKP-212ENST00000599454 TMEM37Q8WXS4 190 aa14.6□□□□□ -0.07
PNKP-212ENST00000599454 SAT2Q96F10 170 aaPredicted RBP14.6□□□□□ -0.07
PNKP-212ENST00000599454 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
PNKP-212ENST00000599454 ZNF586Q9NXT0 402 aa14.6□□□□□ -0.07
PNKP-212ENST00000599454 NPIPB6E9PJ23 425 aa14.59□□□□□ -0.07
PNKP-212ENST00000599454 INPP1P49441 399 aa14.59□□□□□ -0.07
PNKP-212ENST00000599454 OPCMLQ14982 345 aa14.59□□□□□ -0.07
PNKP-212ENST00000599454 C18orf15Q96N68 181 aa14.59□□□□□ -0.07
PNKP-212ENST00000599454 RCL1Q9Y2P8 373 aaKnown RBP14.59□□□□□ -0.07
PNKP-212ENST00000599454 TRAV12-3A0A0B4J271 114 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 CT45A10P0DMU9 189 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 ARL16Q0P5N6 197 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 RAB31Q13636 194 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 ZNF680Q8NEM1 530 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 ZNF431Q8TF32 576 aaPredicted RBP14.58□□□□□ -0.08
PNKP-212ENST00000599454 MGST2Q99735 147 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 DNAJC4Q9NNZ3 241 aa14.58□□□□□ -0.08
PNKP-212ENST00000599454 A0A096LPF7 62 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 H3BQ15 152 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 H3BTX0 84 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 ZNF253O75346 499 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 SLC25A5P05141 298 aaKnown RBP14.57□□□□□ -0.08
PNKP-212ENST00000599454 SPANXN2Q5MJ10 180 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 MORN5Q5VZ52 161 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 Q6ZRG5 221 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 Q6ZTI0 123 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 SRRQ9GZT4 340 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 GSKIPQ9P0R6 139 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 FLVCR2Q9UPI3 526 aa14.57□□□□□ -0.08
PNKP-212ENST00000599454 TRGV2A0A075B6R0 118 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 J3KRW8 73 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 LINC00315P59091 139 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 OR1L4Q8NGR5 311 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 MRPL53Q96EL3 112 aaKnown RBP14.56□□□□□ -0.08
PNKP-212ENST00000599454 VSIG2Q96IQ7 327 aa14.56□□□□□ -0.08
PNKP-212ENST00000599454 LINC00854A0A1B0GVQ3 168 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 CAMLGP49069 296 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 TRIQKQ629K1 86 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 MITD1Q8WV92 249 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 PFDN5Q99471 154 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 LINC00467Q9BRT7 94 aa14.55□□□□□ -0.08
PNKP-212ENST00000599454 SIVA1O15304 175 aa14.54□□□□□ -0.08
PNKP-212ENST00000599454 MBPP02686 304 aaPredicted RBP14.54□□□□□ -0.08
PNKP-212ENST00000599454 CNPY1Q3B7I2 92 aa14.54□□□□□ -0.08
PNKP-212ENST00000599454 Q6ZRN7 208 aaPredicted RBP14.54□□□□□ -0.08
PNKP-212ENST00000599454 C11orf72Q8NBR9 251 aa14.54□□□□□ -0.08
PNKP-212ENST00000599454 PGPEP1Q9NXJ5 209 aa14.54□□□□□ -0.08
PNKP-212ENST00000599454 PTTG2Q9NZH5 202 aa14.54□□□□□ -0.08
PNKP-212ENST00000599454 C7orf71A4D174 169 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 CENPXA8MT69 81 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 EPM2AB3EWF7 344 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 L7N2F9 121 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 EREGO14944 169 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 VAMP2P63027 116 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 NRARPQ7Z6K4 114 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 C12orf45Q8N5I9 185 aaPredicted RBP14.53□□□□□ -0.08
PNKP-212ENST00000599454 GSN-AS1Q9NRJ2 163 aa14.53□□□□□ -0.08
PNKP-212ENST00000599454 CDPF1Q6NVV7 123 aa14.52□□□□□ -0.09
PNKP-212ENST00000599454 EIF4E3Q8N5X7 224 aaKnown RBP14.52□□□□□ -0.09
PNKP-212ENST00000599454 FUT9Q9Y231 359 aa14.52□□□□□ -0.09
PNKP-212ENST00000599454 PRELID1Q9Y255 219 aa14.52□□□□□ -0.09
PNKP-212ENST00000599454 TRGV1A0A0A0MS02 117 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 KLLNB2CW77 178 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 ZNF846Q147U1 533 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 BAK1Q16611 211 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 MIC13Q5XKP0 118 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 LINC00477Q96M19 166 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 ICOSQ9Y6W8 199 aa14.51□□□□□ -0.09
PNKP-212ENST00000599454 DMBT1Q9UGM3 2413 aaPredicted RBP14.51□□□□□ -0.09
PNKP-212ENST00000599454 TRAV5A0A0B4J249 113 aa14.5□□□□□ -0.09
PNKP-212ENST00000599454 SPINK4O60575 86 aa14.5□□□□□ -0.09
PNKP-212ENST00000599454 ERVFC1-1P60608 527 aa14.5□□□□□ -0.09
PNKP-212ENST00000599454 UQCC1Q9NVA1 299 aa14.5□□□□□ -0.09
PNKP-212ENST00000599454 WDR83OSQ9Y284 106 aa14.5□□□□□ -0.09
PNKP-212ENST00000599454 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 PAX4O43316 350 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 ZNF324O75467 553 aaPredicted RBP14.49□□□□□ -0.09
PNKP-212ENST00000599454 BTCP35070 178 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 RPL29P47914 159 aaKnown RBP14.49□□□□□ -0.09
PNKP-212ENST00000599454 BCAP31P51572 246 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 TCL1AP56279 114 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 PDE6HQ13956 83 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 IBA57Q5T440 356 aaKnown RBP14.49□□□□□ -0.09
PNKP-212ENST00000599454 NFE4Q86UQ8 179 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 FAM19A4Q96LR4 140 aa14.49□□□□□ -0.09
PNKP-212ENST00000599454 C20orf85Q9H1P6 137 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms