RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 F5H768 121 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 ATP6V0E1O15342 81 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 Q0VG73 95 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 MST1LQ2TV78 715 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 HAMPP81172 84 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 Q8N8P6 123 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 GBF1Q92538 1859 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 GREB1Q4ZG55 1949 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 TRAV12-1A0A0B4J245 112 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 PRSS46E5RG02 174 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 I3L3M4 83 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 NDUFB8O95169 186 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 B3GALT5-AS1P59052 145 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 FAM104BQ5XKR9 115 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 MAPK1IP1LQ8NDC0 245 aa9.53□□□□□ -0.88
SCN8A-208ENST00000599343 TAF1LQ8IZX4 1826 aa9.52□□□□□ -0.88
SCN8A-208ENST00000599343 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.88
SCN8A-208ENST00000599343 PFN1P07737 140 aaKnown RBP9.52□□□□□ -0.88
SCN8A-208ENST00000599343 GAGE6Q13070 117 aa9.52□□□□□ -0.88
SCN8A-208ENST00000599343 MDS2Q8NDY4 140 aa9.52□□□□□ -0.88
SCN8A-208ENST00000599343 TMEM141Q96I45 108 aa9.52□□□□□ -0.88
SCN8A-208ENST00000599343 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 TRBV25-1A0A075B6N4 114 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
SCN8A-208ENST00000599343 MRPL51Q4U2R6 128 aaKnown RBP9.52□□□□□ -0.89
SCN8A-208ENST00000599343 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 CITED1Q99966 193 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 C9orf118A6NHY6 69 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 LINC01356Q8N9X3 169 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 PDE6HQ13956 83 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 FGF6P10767 208 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 AZU1P20160 251 aa9.52□□□□□ -0.89
SCN8A-208ENST00000599343 CEACAM8P31997 349 aaPredicted RBP9.52□□□□□ -0.89
SCN8A-208ENST00000599343 NRXN2Q9P2S2 1712 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 IGKV1-6A0A0C4DH72 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 E7EQL1 145 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 SBF2Q86WG5 1849 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 RALGAPA2Q2PPJ7 1873 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 GAGE7O76087 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 DAD1P61803 113 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 G3V318 75 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 PAX9P55771 341 aa9.51□□□□□ -0.89
SCN8A-208ENST00000599343 SLAQ13239 276 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 Q6ZS49 121 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 ZNRF2Q8NHG8 242 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 LRRK1Q38SD2 2015 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 CRLF1O75462 422 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 C20orf144Q9BQM9 153 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-208ENST00000599343 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-208ENST00000599343 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-208ENST00000599343 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-208ENST00000599343 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 K7ERJ3 54 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 NPSP0C0P6 89 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 ANXA2RQ3ZCQ2 193 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 Q6ZWC4 215 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 A0A096LPF7 62 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 SDHAF1A6NFY7 115 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 ETDBQ3ZM63 59 aa9.5□□□□□ -0.89
SCN8A-208ENST00000599343 FAM110DQ8TAY7 271 aaPredicted RBP9.5□□□□□ -0.89
SCN8A-208ENST00000599343 WIPF3A6NGB9 483 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
SCN8A-208ENST00000599343 PPDPFLQ8WWR9 84 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 MMP23AO75900 390 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 LINC01619G3V211 115 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 SRSF8Q9BRL6 282 aaKnown RBP9.49□□□□□ -0.89
SCN8A-208ENST00000599343 A0A0G2JMZ2 1700 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 LRRC37A2A6NM11 1700 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TET1Q8NFU7 2136 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 RS1O15537 224 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 HLA-DRB4P13762 266 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TEX36Q5VZQ5 186 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 RNF114Q9Y508 228 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 HLA-DRB4X5D2U9 266 aa9.49□□□□□ -0.89
SCN8A-208ENST00000599343 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 ZNF726P1Q15940 193 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 DUX4L9Q6RFH8 374 aaPredicted RBP9.48□□□□□ -0.89
SCN8A-208ENST00000599343 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 IGHG3P01860 377 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 NDUFA4L2Q9NRX3 87 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 RHODO00212 210 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 IGLC2P0DOY2 106 aa9.48□□□□□ -0.89
SCN8A-208ENST00000599343 IGLC3P0DOY3 106 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms