RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 ALG5Q9Y673 324 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 H3BQ15 152 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 LEPP41159 167 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 PDE6HQ13956 83 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 MORN5Q5VZ52 161 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 LGALS9CQ6DKI2 356 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
LIG1-218ENST00000599322 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 RNF126Q9BV68 326 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 SMIM3Q9BZL3 60 aa10.17□□□□□ -0.78
LIG1-218ENST00000599322 TRBV19A0A075B6N1 114 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 HTN1P15515 57 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 TAS2R45P59539 299 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 DAD1P61803 113 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 C12orf74Q32Q52 190 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 FFAR4Q5NUL3 377 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 FAM222AQ5U5X8 452 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 CCDC28AQ8IWP9 274 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 SAT2Q96F10 170 aaPredicted RBP10.16□□□□□ -0.78
LIG1-218ENST00000599322 C20orf144Q9BQM9 153 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 OR51M1Q9H341 326 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 ZNF586Q9NXT0 402 aa10.16□□□□□ -0.78
LIG1-218ENST00000599322 YTHDF2Q9Y5A9 579 aaKnown RBP10.16□□□□□ -0.78
LIG1-218ENST00000599322 FRAS1Q86XX4 4008 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 TRAV12-2A0A075B6T6 113 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 SLC17A3O00476 420 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 CSN1S1P47710 185 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 TAS2R60P59551 318 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 ZNF767PQ75MW2 155 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 BAP18Q8IXM2 172 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 RPP25LQ8N5L8 163 aaKnown RBP10.15□□□□□ -0.78
LIG1-218ENST00000599322 ASB13Q8WXK3 278 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 NDUFAF3Q9BU61 184 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 DKK2Q9UBU2 259 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 FUT9Q9Y231 359 aa10.15□□□□□ -0.78
LIG1-218ENST00000599322 IGHV4-4A0A075B6R2 117 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 ZNF705GA8MUZ8 300 aaPredicted RBP10.14□□□□□ -0.79
LIG1-218ENST00000599322 H7BYZ3 331 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 OR7C2O60412 319 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 NBEAP1P0C6P0 100 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 ZNF266Q14584 549 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 OXA1LQ15070 435 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 ACOT6Q3I5F7 207 aaPredicted RBP10.14□□□□□ -0.79
LIG1-218ENST00000599322 GCSAMLQ5JQS6 135 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 ZNF493Q6ZR52 646 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 MIR17HGQ75NE6 70 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 FAM210BQ96KR6 192 aa10.14□□□□□ -0.79
LIG1-218ENST00000599322 CRXO43186 299 aaPredicted RBP10.13□□□□□ -0.79
LIG1-218ENST00000599322 PYYP10082 97 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 HTN3P15516 51 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 RGS21Q2M5E4 152 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 KHDC3LQ587J8 217 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 TMEM78Q5T7P6 136 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 INO80EQ8NBZ0 244 aaPredicted RBP10.13□□□□□ -0.79
LIG1-218ENST00000599322 RNF141Q8WVD5 230 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 LINC00477Q96M19 166 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 ODF3Q96PU9 254 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
LIG1-218ENST00000599322 PARD6GQ9BYG4 376 aaPredicted RBP10.13□□□□□ -0.79
LIG1-218ENST00000599322 NPIPB6E9PJ23 425 aa10.12□□□□□ -0.79
LIG1-218ENST00000599322 ICAM4Q14773 271 aa10.12□□□□□ -0.79
LIG1-218ENST00000599322 FCN2Q15485 313 aa10.12□□□□□ -0.79
LIG1-218ENST00000599322 FAM74A1Q5RGS3 127 aa10.12□□□□□ -0.79
LIG1-218ENST00000599322 APLNQ9ULZ1 77 aa10.12□□□□□ -0.79
LIG1-218ENST00000599322 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
LIG1-218ENST00000599322 J3KRW8 73 aa10.11□□□□□ -0.79
LIG1-218ENST00000599322 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
LIG1-218ENST00000599322 GIPP09681 153 aaPredicted RBP10.11□□□□□ -0.79
LIG1-218ENST00000599322 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
LIG1-218ENST00000599322 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
LIG1-218ENST00000599322 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
LIG1-218ENST00000599322 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 M0R3E3 92 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 OR10J4P0C629 311 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 P0DMU3 169 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 PRB4P10163 310 aaPredicted RBP10.1□□□□□ -0.79
LIG1-218ENST00000599322 M6PRP20645 277 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 FAM122CQ6P4D5 195 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 EXOC3-AS1Q8N2X6 119 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 TMEM263Q8WUH6 116 aaKnown RBP10.1□□□□□ -0.79
LIG1-218ENST00000599322 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
LIG1-218ENST00000599322 SNURFLB1AK76 121 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 NDUFB4O95168 129 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 MBP02144 154 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 GPX1P07203 203 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 RANP62826 216 aaKnown RBP10.09□□□□□ -0.79
LIG1-218ENST00000599322 GFI1BQ5VTD9 330 aa10.09□□□□□ -0.79
LIG1-218ENST00000599322 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms