RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 UBE2L3P68036 154 aaKnown RBP14.87□□□□□ -0.03
PNKP-211ENST00000598020 AKR1C8PQ5T2L2 129 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 BAP18Q8IXM2 172 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 LYPD1Q8N2G4 141 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 STOML3Q8TAV4 291 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 RETNQ9HD89 108 aa14.87□□□□□ -0.03
PNKP-211ENST00000598020 SPRY2O43597 315 aa14.86□□□□□ -0.03
PNKP-211ENST00000598020 C4BPBP20851 252 aa14.86□□□□□ -0.03
PNKP-211ENST00000598020 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
PNKP-211ENST00000598020 OR4B1Q8NGF8 309 aa14.86□□□□□ -0.03
PNKP-211ENST00000598020 AAMDCQ9H7C9 122 aa14.86□□□□□ -0.03
PNKP-211ENST00000598020 ZNF705FA8MVS1 300 aaPredicted RBP14.85□□□□□ -0.03
PNKP-211ENST00000598020 EIF3GO75821 320 aaKnown RBP eCLIP14.85□□□□□ -0.03
PNKP-211ENST00000598020 CNN1P51911 297 aaKnown RBP14.85□□□□□ -0.03
PNKP-211ENST00000598020 ZFP69Q49AA0 526 aa14.85□□□□□ -0.03
PNKP-211ENST00000598020 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
PNKP-211ENST00000598020 SUN5Q8TC36 379 aa14.85□□□□□ -0.03
PNKP-211ENST00000598020 C1QTNF4Q9BXJ3 329 aa14.85□□□□□ -0.03
PNKP-211ENST00000598020 CTXND1A0A1B0GTU2 59 aa14.84□□□□□ -0.03
PNKP-211ENST00000598020 ARL14EPLP0DKL9 152 aa14.84□□□□□ -0.03
PNKP-211ENST00000598020 TPT1P13693 172 aaKnown RBP14.84□□□□□ -0.03
PNKP-211ENST00000598020 C9orf62Q8N4C0 152 aa14.84□□□□□ -0.03
PNKP-211ENST00000598020 CSNK1G2-AS1Q8NCQ2 148 aa14.84□□□□□ -0.03
PNKP-211ENST00000598020 PHYHIPLQ96FC7 376 aa14.84□□□□□ -0.03
PNKP-211ENST00000598020 UMAD1C9J7I0 102 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 PRAC2D3DTV9 90 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 HMGB3O15347 200 aaKnown RBP14.83□□□□□ -0.04
PNKP-211ENST00000598020 CXorf1O96002 111 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 IGKV3-20P01619 116 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 ZNF726P1Q15940 193 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 EXOC3-AS1Q8N2X6 119 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 PLA2G2EQ9NZK7 142 aa14.83□□□□□ -0.04
PNKP-211ENST00000598020 M0R3E3 92 aa14.82□□□□□ -0.04
PNKP-211ENST00000598020 ZNF705DP0CH99 300 aaPredicted RBP14.82□□□□□ -0.04
PNKP-211ENST00000598020 ZNF705BP0CI00 300 aaPredicted RBP14.82□□□□□ -0.04
PNKP-211ENST00000598020 RANP62826 216 aaKnown RBP14.82□□□□□ -0.04
PNKP-211ENST00000598020 HIST1H1AQ02539 215 aaPredicted RBP14.82□□□□□ -0.04
PNKP-211ENST00000598020 ICAM4Q14773 271 aa14.82□□□□□ -0.04
PNKP-211ENST00000598020 SSX7Q7RTT5 188 aa14.82□□□□□ -0.04
PNKP-211ENST00000598020 OR10J6PQ8NGY7 276 aa14.82□□□□□ -0.04
PNKP-211ENST00000598020 GCHFRP30047 84 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 SLC51BQ86UW2 128 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 SLC35B3Q9H1N7 401 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 Q9H3A6 140 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 TMEM167BQ9NRX6 74 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 XCL2Q9UBD3 114 aa14.81□□□□□ -0.04
PNKP-211ENST00000598020 AMBPP02760 352 aa14.8□□□□□ -0.04
PNKP-211ENST00000598020 DPPA3Q6W0C5 159 aa14.8□□□□□ -0.04
PNKP-211ENST00000598020 ARL6IP6Q8N6S5 226 aa14.8□□□□□ -0.04
PNKP-211ENST00000598020 OTORQ9NRC9 128 aa14.8□□□□□ -0.04
PNKP-211ENST00000598020 NPIPB6E9PJ23 425 aa14.79□□□□□ -0.04
PNKP-211ENST00000598020 EIF5AL1Q6IS14 154 aaKnown RBP14.79□□□□□ -0.04
PNKP-211ENST00000598020 RXFP4Q8TDU9 374 aa14.79□□□□□ -0.04
PNKP-211ENST00000598020 TMED6Q8WW62 240 aa14.79□□□□□ -0.04
PNKP-211ENST00000598020 RARRES2Q99969 163 aa14.79□□□□□ -0.04
PNKP-211ENST00000598020 EDA2RQ9HAV5 297 aa14.79□□□□□ -0.04
PNKP-211ENST00000598020 ZNF705EA8MWA4 302 aaPredicted RBP14.78□□□□□ -0.04
PNKP-211ENST00000598020 BOLA2-SMG1P6H3BVE0 249 aa14.78□□□□□ -0.04
PNKP-211ENST00000598020 OR11H2Q8NH07 326 aa14.78□□□□□ -0.04
PNKP-211ENST00000598020 WWC2-AS2Q96NR7 200 aa14.78□□□□□ -0.04
PNKP-211ENST00000598020 ODF3Q96PU9 254 aa14.78□□□□□ -0.04
PNKP-211ENST00000598020 PRB4P10163 310 aaPredicted RBP14.77□□□□□ -0.05
PNKP-211ENST00000598020 CSN1S1P47710 185 aa14.77□□□□□ -0.05
PNKP-211ENST00000598020 FXYD7P58549 80 aa14.77□□□□□ -0.05
PNKP-211ENST00000598020 FAM74A1Q5RGS3 127 aa14.77□□□□□ -0.05
PNKP-211ENST00000598020 C9orf47Q6ZRZ4 202 aa14.77□□□□□ -0.05
PNKP-211ENST00000598020 MBD3L1Q8WWY6 194 aa14.77□□□□□ -0.05
PNKP-211ENST00000598020 RBAKDNA6NC62 111 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 MAP1LC3B2A6NCE7 125 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 PGPA6NDG6 321 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 CRXO43186 299 aaPredicted RBP14.76□□□□□ -0.05
PNKP-211ENST00000598020 FHITP49789 147 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 RAB5CP51148 216 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 ZNF705AQ6ZN79 300 aaPredicted RBP14.76□□□□□ -0.05
PNKP-211ENST00000598020 IGF2BP2-AS1Q96M15 143 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 LINC00477Q96M19 166 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 MAP1LC3BQ9GZQ8 125 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 PPP1R14DQ9NXH3 145 aa14.76□□□□□ -0.05
PNKP-211ENST00000598020 A0A1W2PRE2 83 aa14.75□□□□□ -0.05
PNKP-211ENST00000598020 SLC25A5P05141 298 aaKnown RBP14.75□□□□□ -0.05
PNKP-211ENST00000598020 SPINK13Q1W4C9 94 aa14.75□□□□□ -0.05
PNKP-211ENST00000598020 AGPAT4-IT1Q9H0P7 198 aa14.75□□□□□ -0.05
PNKP-211ENST00000598020 X6R8D5 127 aa14.75□□□□□ -0.05
PNKP-211ENST00000598020 DIRC3C9JPN6 131 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 M0R2Z0 102 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 CT45A10P0DMU9 189 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 TSPOP30536 169 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 CDKN1BP46527 198 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 FAM213BQ8TBF2 198 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 NEU1Q99519 415 aa14.74□□□□□ -0.05
PNKP-211ENST00000598020 MIFP14174 115 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 FGF8P55075 233 aaPredicted RBP14.73□□□□□ -0.05
PNKP-211ENST00000598020 C1orf158Q8N1D5 194 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 CMTM2Q8TAZ6 248 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 FAM19A4Q96LR4 140 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 VGLL1Q99990 258 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 TMPRSS5Q9H3S3 457 aa14.73□□□□□ -0.05
PNKP-211ENST00000598020 IGKV2-40A0A087WW87 121 aaPredicted RBP14.72□□□□□ -0.05
PNKP-211ENST00000598020 TRBV7-9A0A0J9YWB2 115 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms