RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 BAP18Q8IXM2 172 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 OR8A1Q8NGG7 326 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 ENKURQ8TC29 256 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 DNAJC4Q9NNZ3 241 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 LRP1BQ9NZR2 4599 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 UBE2L5PA0A1B0GUS4 154 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 PRAC2D3DTV9 90 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 S100A11P31949 105 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
TRIM28-212ENST00000597995 CCL18P55774 89 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 HIST1H1AQ02539 215 aaPredicted RBP8.77□□□□□ -1.01
TRIM28-212ENST00000597995 NHLH2Q02577 135 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 RPUSD4Q96CM3 377 aaKnown RBP8.77□□□□□ -1.01
TRIM28-212ENST00000597995 SAT2Q96F10 170 aaPredicted RBP8.77□□□□□ -1.01
TRIM28-212ENST00000597995 MARVELD1Q9BSK0 173 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 OR5AC2Q9NZP5 309 aa8.77□□□□□ -1.01
TRIM28-212ENST00000597995 CBY3A6NI87 242 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 F5H768 121 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 INMT-MINDY4F8WBC2 141 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 BOLA2-SMG1P6H3BVE0 249 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 ATP5G1P05496 136 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 CXCL2P19875 107 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 ATP5G3P48201 142 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 LCN15Q6UWW0 184 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 BPIFA4PQ86YQ2 179 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 NMES1Q9C002 83 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 GPN1Q9HCN4 374 aaPredicted RBP8.76□□□□□ -1.01
TRIM28-212ENST00000597995 SLC39A9Q9NUM3 307 aa8.76□□□□□ -1.01
TRIM28-212ENST00000597995 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 PRAF2O60831 178 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 NUDT3O95989 172 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 AZU1P20160 251 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 FGF7P21781 194 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 H2BFSP57053 126 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 BAXQ07812 192 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 RAB31Q13636 194 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 GCSAMLQ5JQS6 135 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 Q6ZRG5 221 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 STX12Q86Y82 276 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 TMEM256Q8N2U0 113 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 LRRC20Q8TCA0 184 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 LINC00588Q9Y4M8 146 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 PXMP4Q9Y6I8 212 aa8.75□□□□□ -1.01
TRIM28-212ENST00000597995 TAS2R60P59551 318 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 RHOBP62745 196 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 HBG1P69891 147 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 HBG2P69892 147 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 LRRC37A5PQ49AS3 106 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 Q8N1X5 172 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 OR1L4Q8NGR5 311 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 NPCDR1Q9BY65 106 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 PARD6GQ9BYG4 376 aaPredicted RBP8.74□□□□□ -1.01
TRIM28-212ENST00000597995 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
TRIM28-212ENST00000597995 E5RGE8 158 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 NDUFB4O95168 129 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 DEFA1P59665 94 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 DEFA3P59666 94 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 FCN2Q15485 313 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 OR5C1Q8NGR4 320 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 THAP6Q8TBB0 222 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 C16orf74Q96GX8 76 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 LINC01587Q99440 93 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 PFDN5Q99471 154 aa8.73□□□□□ -1.01
TRIM28-212ENST00000597995 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
TRIM28-212ENST00000597995 CDKN1BP46527 198 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 CLINT1Q14677 625 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 ZNF493Q6ZR52 646 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 PPP1R1CQ8WVI7 109 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 FAM167A-AS1Q96KT0 104 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 Q9H8V8 135 aa8.72□□□□□ -1.01
TRIM28-212ENST00000597995 TRBV19A0A075B6N1 114 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 M0R3E3 92 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 MPDU1O75352 247 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 RLN2P04090 185 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 PYYP10082 97 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
TRIM28-212ENST00000597995 GUK1Q16774 197 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 TTC32Q5I0X7 151 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 SLC25A2Q9BXI2 301 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 SLC25A31Q9H0C2 315 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 PPP1R14DQ9NXH3 145 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 TMEM14CQ9P0S9 112 aa8.71□□□□□ -1.02
TRIM28-212ENST00000597995 NPIPB6E9PJ23 425 aa8.7□□□□□ -1.02
TRIM28-212ENST00000597995 ZNF253O75346 499 aa8.7□□□□□ -1.02
TRIM28-212ENST00000597995 MPC2O95563 127 aa8.7□□□□□ -1.02
TRIM28-212ENST00000597995 BTF3P20290 206 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms