RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PFDN1O60925 122 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 NDUFB4O95168 129 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 PQLC2Q6ZP29 291 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 OR11H2Q8NH07 326 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF503Q96F45 646 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 RARRES2Q99969 163 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 SLC35B3Q9H1N7 401 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 PPP1R14DQ9NXH3 145 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 PRELID1Q9Y255 219 aa14.35□□□□□ -0.11
SHKBP1-214ENST00000597396 A8MTW9 85 aa14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 HMGB3O15347 200 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 AKR1C8PQ5T2L2 129 aa14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 TMUB2Q71RG4 321 aa14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 RPP25LQ8N5L8 163 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 OR10J6PQ8NGY7 276 aa14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 MRPL53Q96EL3 112 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF471Q9BX82 626 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 ACTR3CQ9C0K3 210 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-214ENST00000597396 C1QBP02746 253 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 ICAM4Q14773 271 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 EXOC3-AS1Q8N2X6 119 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 RAB24Q969Q5 203 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 PHYHIPLQ96FC7 376 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 EDA2RQ9HAV5 297 aa14.33□□□□□ -0.12
SHKBP1-214ENST00000597396 A0A1B0GVG6 124 aa14.32□□□□□ -0.12
SHKBP1-214ENST00000597396 PRAC2D3DTV9 90 aa14.32□□□□□ -0.12
SHKBP1-214ENST00000597396 M0R3E3 92 aa14.32□□□□□ -0.12
SHKBP1-214ENST00000597396 EIF5AP63241 154 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-214ENST00000597396 AMTNQ6UX39 209 aa14.32□□□□□ -0.12
SHKBP1-214ENST00000597396 BOLA2-SMG1P6H3BVE0 249 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 AMBPP02760 352 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 STAG3L2P0CL84 134 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 STAG3L3P0CL85 134 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 ARL14EPLP0DKL9 152 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 RANP62826 216 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 CSNK1G2-AS1Q8NCQ2 148 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 HYLS1Q96M11 299 aa14.31□□□□□ -0.12
SHKBP1-214ENST00000597396 A0A0J9YWU9 116 aa14.3□□□□□ -0.12
SHKBP1-214ENST00000597396 SPINK13Q1W4C9 94 aa14.3□□□□□ -0.12
SHKBP1-214ENST00000597396 LYPD1Q8N2G4 141 aa14.3□□□□□ -0.12
SHKBP1-214ENST00000597396 Q9H3A6 140 aa14.3□□□□□ -0.12
SHKBP1-214ENST00000597396 M0R2Z0 102 aa14.29□□□□□ -0.12
SHKBP1-214ENST00000597396 IGHV3OR16-12A0A075B7B8 117 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 CTXND1A0A1B0GTU2 59 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 ZNF705EA8MWA4 302 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 CXorf1O96002 111 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 TPT1P13693 172 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 CSN1S1P47710 185 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 LGALSLQ3ZCW2 172 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 IQCF2Q8IXL9 164 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 IGF2BP2-AS1Q96M15 143 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 GOLT1BQ9Y3E0 138 aa14.28□□□□□ -0.12
SHKBP1-214ENST00000597396 RYR3Q15413 4870 aa14.27□□□□□ -0.12
SHKBP1-214ENST00000597396 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 INSP01308 110 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 SEC11BP0C7V7 166 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 GCHFRP30047 84 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 CD300CQ08708 224 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 FAM74A1Q5RGS3 127 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 SSX7Q7RTT5 188 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 MUC7Q8TAX7 377 aa14.27□□□□□ -0.13
SHKBP1-214ENST00000597396 MIFP14174 115 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 TSPOP30536 169 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 ZNF726P1Q15940 193 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 ZFP69Q49AA0 526 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 TMEM208Q9BTX3 173 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 OTORQ9NRC9 128 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 TMEM167BQ9NRX6 74 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 X6R8D5 127 aa14.26□□□□□ -0.13
SHKBP1-214ENST00000597396 TRAV12-2A0A075B6T6 113 aa14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 IGKV2-40A0A087WW87 121 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 PGPA6NDG6 321 aa14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 IGKV2D-40P01614 121 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 CDKN1BP46527 198 aa14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 ERCC8Q13216 396 aa14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 ZNF705AQ6ZN79 300 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 CMTM2Q8TAZ6 248 aa14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 C11orf68Q9H3H3 251 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-214ENST00000597396 IGHV4-28A0A0C4DH34 117 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 C3orf84H3BNL1 204 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 DEFB4AO15263 64 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 CT45A10P0DMU9 189 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 LEPP41159 167 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 C1orf158Q8N1D5 194 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 Q8NAQ8 132 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 STOML3Q8TAV4 291 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 RXFP4Q8TDU9 374 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 LINC00477Q96M19 166 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 ODF3Q96PU9 254 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 RPH3ALQ9UNE2 315 aa14.24□□□□□ -0.13
SHKBP1-214ENST00000597396 MAP1LC3B2A6NCE7 125 aa14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 UMAD1C9J7I0 102 aa14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 CRXO43186 299 aaPredicted RBP14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 TMEM78Q5T7P6 136 aa14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 TMED6Q8WW62 240 aa14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 MAP1LC3BQ9GZQ8 125 aa14.23□□□□□ -0.13
SHKBP1-214ENST00000597396 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
SHKBP1-214ENST00000597396 J3KRW8 73 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms