RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 ARL2-SNX15V9GYD0 113 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 OR4C46A6NHA9 309 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 SLC17A3O00476 420 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 PAGE4O60829 102 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 BCL2P10415 239 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 WFDC3Q8IUB2 231 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 C17orf77Q96MU5 243 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 Q9H3A6 140 aa9.03□□□□□ -0.96
SHKBP1-213ENST00000597325 ISLRO14498 428 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 HAGHQ16775 308 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 ZFAND6Q6FIF0 208 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 DCANP1Q8TF63 244 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 ASCL2Q99929 193 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 EIF5A2Q9GZV4 153 aaKnown RBP9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 ZNF331Q9NQX6 463 aaPredicted RBP9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 CLEC5AQ9NY25 188 aa9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
SHKBP1-213ENST00000597325 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 RBFOX3A6NFN3 312 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 FAM74A7A6NL05 159 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 K7EQG2 157 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 NDUFB4O95168 129 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 CSN1S1P47710 185 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 PMS2P11Q13670 270 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 ICAM4Q14773 271 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 TOR2AQ5JU69 321 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 EXOC3-AS1Q8N2X6 119 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 FAM210AQ96ND0 272 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 TXNDC17Q9BRA2 123 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 VAX2Q9UIW0 290 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 PRELID1Q9Y255 219 aa9.01□□□□□ -0.97
SHKBP1-213ENST00000597325 IZUMO1RA6ND01 250 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 PGPA6NDG6 321 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 GGTLC3B5MD39 225 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 C11orf94C9JXX5 98 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 SOCS3O14543 225 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
SHKBP1-213ENST00000597325 ATP5G3P48201 142 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 MEF2BQ02080 365 aaPredicted RBP9□□□□□ -0.97
SHKBP1-213ENST00000597325 ZNF506Q5JVG8 444 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 RNF182Q8N6D2 247 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 C5orf17Q8NAS9 161 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 ZNF738Q8NE65 137 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 LINC00052Q96N35 136 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 TCEAL7Q9BRU2 100 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 RPH3ALQ9UNE2 315 aa9□□□□□ -0.97
SHKBP1-213ENST00000597325 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 ZNF688P0C7X2 276 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 PEA15Q15121 130 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 PSMG4Q5JS54 123 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 IGFL4Q6B9Z1 124 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 COMMD7Q86VX2 200 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 MED9Q9NWA0 146 aa8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 ZMAT5Q9UDW3 170 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-213ENST00000597325 RAB19A4D1S5 217 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 LINC00862A6NCI5 91 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 F6UZH7 168 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 PDE6DO43924 150 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 HLA-DMBP28068 263 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 CMC4P56277 68 aaPredicted RBP8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 PSG3Q16557 428 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 GTSCR1Q86UQ5 136 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 RARRES2Q99969 163 aa8.98□□□□□ -0.97
SHKBP1-213ENST00000597325 OR11H12B2RN74 326 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 K7EQM0 130 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 M0R3E3 92 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 GNG5P63218 68 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 FAM24BQ8N5W8 94 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 RPUSD4Q96CM3 377 aaKnown RBP8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 SMDT1Q9H4I9 107 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 ZNF256Q9Y2P7 627 aaPredicted RBP8.97□□□□□ -0.97
SHKBP1-213ENST00000597325 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
SHKBP1-213ENST00000597325 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 SCO2A0A1W2PP80 73 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 PEX7O00628 323 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 AKR1C3P42330 323 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 DEFB131AP59861 70 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 CD81P60033 236 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 UQCC3Q6UW78 93 aa8.96□□□□□ -0.98
SHKBP1-213ENST00000597325 CCDC28AQ8IWP9 274 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms