RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 OR11H4Q8NGC9 324 aa8.06□□□□□ -1.12
LIG1-211ENST00000596457 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
LIG1-211ENST00000596457 OR2G3Q8NGZ4 309 aa8.06□□□□□ -1.12
LIG1-211ENST00000596457 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
LIG1-211ENST00000596457 RYR1P21817 5038 aa8.06□□□□□ -1.12
LIG1-211ENST00000596457 TRAV12-2A0A075B6T6 113 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 J3KRW8 73 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 M0R3E3 92 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 TAAR5O14804 337 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 NDUFB4O95168 129 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 RANP62826 216 aaKnown RBP8.05□□□□□ -1.12
LIG1-211ENST00000596457 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
LIG1-211ENST00000596457 PMS2P11Q13670 270 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 ZNF503Q96F45 646 aa8.05□□□□□ -1.12
LIG1-211ENST00000596457 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
LIG1-211ENST00000596457 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 ZNF253O75346 499 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
LIG1-211ENST00000596457 ERCC8Q13216 396 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 AMTNQ6UX39 209 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 GNPNAT1Q96EK6 184 aaPredicted RBP8.04□□□□□ -1.12
LIG1-211ENST00000596457 PHYHIPLQ96FC7 376 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 ARPC5LQ9BPX5 153 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 TMEM208Q9BTX3 173 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 GOLT1BQ9Y3E0 138 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 X6R8D5 127 aa8.04□□□□□ -1.12
LIG1-211ENST00000596457 DYNC2H1Q8NCM8 4307 aaKnown RBP8.03□□□□□ -1.12
LIG1-211ENST00000596457 CXorf65A6NEN9 183 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 HMSDA8MTL9 139 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 A8MTW9 85 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 JTBO76095 146 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 MBP02144 154 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 RBMY1A1P0DJD3 496 aaKnown RBP8.03□□□□□ -1.12
LIG1-211ENST00000596457 RBMY1CP0DJD4 496 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 MIFP14174 115 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 SERF2P84101 59 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 PDE6HQ13956 83 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 RBMY1FQ15415 496 aaKnown RBP8.03□□□□□ -1.12
LIG1-211ENST00000596457 IQCF2Q8IXL9 164 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 BAP18Q8IXM2 172 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 KCNRGQ8N5I3 272 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 RAB24Q969Q5 203 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 ST6GAL2Q96JF0 529 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 ACTR3CQ9C0K3 210 aaPredicted RBP8.03□□□□□ -1.12
LIG1-211ENST00000596457 Q9H3A6 140 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 CYTL1Q9NRR1 136 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 RPH3ALQ9UNE2 315 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
LIG1-211ENST00000596457 IGKV2-40A0A087WW87 121 aaPredicted RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 A0A0D9SG52 128 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 ZNF705EA8MWA4 302 aaPredicted RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 PFDN1O60925 122 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 INSP01308 110 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 IGKV2D-40P01614 121 aaPredicted RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 AMBPP02760 352 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 HTN1P15515 57 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 CSN1S1P47710 185 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 EMP1P54849 157 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 NANOS2P60321 138 aaKnown RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 AKR1C8PQ5T2L2 129 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 C1orf158Q8N1D5 194 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 RPP25LQ8N5L8 163 aaKnown RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 Q8NAQ8 132 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 IGF2BP2-AS1Q96M15 143 aa8.02□□□□□ -1.13
LIG1-211ENST00000596457 ZNF471Q9BX82 626 aaPredicted RBP8.02□□□□□ -1.13
LIG1-211ENST00000596457 PGPA6NDG6 321 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 CRXO43186 299 aaPredicted RBP8.01□□□□□ -1.13
LIG1-211ENST00000596457 PRM2P04554 102 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 CDKN1BP46527 198 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 ZNF345Q14585 488 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 TMUB2Q71RG4 321 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 C11orf45Q8TAV5 145 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
LIG1-211ENST00000596457 LINC01587Q99440 93 aa8.01□□□□□ -1.13
LIG1-211ENST00000596457 C11orf68Q9H3H3 251 aaKnown RBP8.01□□□□□ -1.13
LIG1-211ENST00000596457 SACSQ9NZJ4 4579 aa8□□□□□ -1.13
LIG1-211ENST00000596457 ZNF705GA8MUZ8 300 aaPredicted RBP8□□□□□ -1.13
LIG1-211ENST00000596457 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
LIG1-211ENST00000596457 BCL2L11O43521 198 aa8□□□□□ -1.13
LIG1-211ENST00000596457 HBE1P02100 147 aa8□□□□□ -1.13
LIG1-211ENST00000596457 STAG3L2P0CL84 134 aa8□□□□□ -1.13
LIG1-211ENST00000596457 STAG3L3P0CL85 134 aa8□□□□□ -1.13
LIG1-211ENST00000596457 GCHFRP30047 84 aa8□□□□□ -1.13
LIG1-211ENST00000596457 TSPOP30536 169 aa8□□□□□ -1.13
LIG1-211ENST00000596457 LEPP41159 167 aa8□□□□□ -1.13
LIG1-211ENST00000596457 KIR3DS1Q14943 382 aa8□□□□□ -1.13
LIG1-211ENST00000596457 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
LIG1-211ENST00000596457 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
LIG1-211ENST00000596457 SSX7Q7RTT5 188 aa8□□□□□ -1.13
LIG1-211ENST00000596457 AKAP14Q86UN6 197 aa8□□□□□ -1.13
LIG1-211ENST00000596457 VGLL1Q99990 258 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms