RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
USHBP1-206ENST00000596436 AMTNQ6UX39 209 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 Q6ZNX1 250 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
USHBP1-206ENST00000596436 HIST1H1EP10412 219 aaKnown RBP11.49□□□□□ -0.57
USHBP1-206ENST00000596436 ATP6V0CP27449 155 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 RAB2AP61019 212 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 GUK1Q16774 197 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 Q8NAQ8 132 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 OR11H4Q8NGC9 324 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
USHBP1-206ENST00000596436 DYNC1H1Q14204 4646 aaKnown RBP11.49□□□□□ -0.57
USHBP1-206ENST00000596436 PRAC2D3DTV9 90 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF253O75346 499 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 OR10J4P0C629 311 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 NUTF2P61970 127 aaKnown RBP11.48□□□□□ -0.57
USHBP1-206ENST00000596436 PSG9Q00887 426 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 OR2G3Q8NGZ4 309 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 FXYD5Q96DB9 178 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 X6R8D5 127 aa11.48□□□□□ -0.57
USHBP1-206ENST00000596436 DNAH11Q96DT5 4516 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 M6PRP20645 277 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 RHOBP62745 196 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
USHBP1-206ENST00000596436 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
USHBP1-206ENST00000596436 BLNKQ8WV28 456 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
USHBP1-206ENST00000596436 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
USHBP1-206ENST00000596436 M0R3E3 92 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 DEFB4AO15263 64 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 OR7C2O60412 319 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 DUSP14O95147 198 aaKnown RBP11.46□□□□□ -0.57
USHBP1-206ENST00000596436 FAM122CQ6P4D5 195 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 PHYHIPLQ96FC7 376 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 ST6GAL2Q96JF0 529 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 CYTL1Q9NRR1 136 aa11.46□□□□□ -0.57
USHBP1-206ENST00000596436 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 M0R2Z0 102 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 NBEAP1P0C6P0 100 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 RBMY1A1P0DJD3 496 aaKnown RBP11.45□□□□□ -0.58
USHBP1-206ENST00000596436 RBMY1CP0DJD4 496 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 PDE6HQ13956 83 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
USHBP1-206ENST00000596436 SPINK13Q1W4C9 94 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
USHBP1-206ENST00000596436 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 OR10G4Q8NGN3 311 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 OR10G9Q8NGN4 311 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 OR10G7Q8NGN6 311 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 RNF141Q8WVD5 230 aa11.45□□□□□ -0.58
USHBP1-206ENST00000596436 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
USHBP1-206ENST00000596436 A0A1B0GVY2 172 aa11.44□□□□□ -0.58
USHBP1-206ENST00000596436 IGLL5B9A064 214 aa11.44□□□□□ -0.58
USHBP1-206ENST00000596436 CRXO43186 299 aaPredicted RBP11.44□□□□□ -0.58
USHBP1-206ENST00000596436 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
USHBP1-206ENST00000596436 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
USHBP1-206ENST00000596436 KCNRGQ8N5I3 272 aa11.44□□□□□ -0.58
USHBP1-206ENST00000596436 hCG_2014768A0A024R1R8 64 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 BOLA2-SMG1P6H3BVE0 249 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
USHBP1-206ENST00000596436 TAS2R45P59539 299 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 ZNF345Q14585 488 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 ICAM4Q14773 271 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
USHBP1-206ENST00000596436 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
USHBP1-206ENST00000596436 MRPL53Q96EL3 112 aaKnown RBP11.43□□□□□ -0.58
USHBP1-206ENST00000596436 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 TAAR5O14804 337 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 MIFP14174 115 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 CDC34P49427 236 aaPredicted RBP11.42□□□□□ -0.58
USHBP1-206ENST00000596436 SERF2P84101 59 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 IGF2BP2-AS1Q96M15 143 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 ABCA13Q86UQ4 5058 aa11.42□□□□□ -0.58
USHBP1-206ENST00000596436 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 Q6ZTC4 211 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 ARPC5LQ9BPX5 153 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 AAMDCQ9H7C9 122 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 PRELID1Q9Y255 219 aa11.41□□□□□ -0.58
USHBP1-206ENST00000596436 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 TRAV10A0A0B4J240 114 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 AMBPP02760 352 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms