RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
HOMER3-208ENST00000595756 ZNF253O75346 499 aa12.9□□□□□ -0.34
HOMER3-208ENST00000595756 EBLN2Q6P2I7 272 aa12.9□□□□□ -0.34
HOMER3-208ENST00000595756 FOXI2Q6ZQN5 318 aa12.9□□□□□ -0.34
HOMER3-208ENST00000595756 C17orf77Q96MU5 243 aa12.9□□□□□ -0.34
HOMER3-208ENST00000595756 HERC2O95714 4834 aa12.9□□□□□ -0.34
HOMER3-208ENST00000595756 PFDN1O60925 122 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 AMBPP02760 352 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 PDE6HQ13956 83 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 SLC25A2Q9BXI2 301 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 OR51M1Q9H341 326 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 DNAH17Q9UFH2 4485 aa12.89□□□□□ -0.35
HOMER3-208ENST00000595756 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 BCL2L11O43521 198 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 PSG9Q00887 426 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF705AQ6ZN79 300 aaPredicted RBP12.88□□□□□ -0.35
HOMER3-208ENST00000595756 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 NEU1Q99519 415 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF331Q9NQX6 463 aaPredicted RBP12.88□□□□□ -0.35
HOMER3-208ENST00000595756 CYTL1Q9NRR1 136 aa12.88□□□□□ -0.35
HOMER3-208ENST00000595756 H3BQ15 152 aa12.87□□□□□ -0.35
HOMER3-208ENST00000595756 PSG3Q16557 428 aa12.87□□□□□ -0.35
HOMER3-208ENST00000595756 GDF5OSQ5U4N7 250 aa12.87□□□□□ -0.35
HOMER3-208ENST00000595756 PQLC2Q6ZP29 291 aa12.87□□□□□ -0.35
HOMER3-208ENST00000595756 TMUB2Q71RG4 321 aa12.87□□□□□ -0.35
HOMER3-208ENST00000595756 SAT2Q96F10 170 aaPredicted RBP12.87□□□□□ -0.35
HOMER3-208ENST00000595756 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 OR7C2O60412 319 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF705DP0CH99 300 aaPredicted RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF705BP0CI00 300 aaPredicted RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 RAB2AP61019 212 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 FAM122CQ6P4D5 195 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF471Q9BX82 626 aaPredicted RBP12.86□□□□□ -0.35
HOMER3-208ENST00000595756 SH3BGRL3Q9H299 93 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 RFNGQ9Y644 331 aa12.86□□□□□ -0.35
HOMER3-208ENST00000595756 PKHD1P08F94 4074 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 PYYP10082 97 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 ZNF738Q8NE65 137 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
HOMER3-208ENST00000595756 AAMDCQ9H7C9 122 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
HOMER3-208ENST00000595756 DEFB131BA0A096LNP1 70 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 A0A0J9YX75 114 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 SEC11BP0C7V7 166 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 DEFB1P60022 68 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
HOMER3-208ENST00000595756 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
HOMER3-208ENST00000595756 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
HOMER3-208ENST00000595756 TPT1P13693 172 aaKnown RBP12.83□□□□□ -0.36
HOMER3-208ENST00000595756 UBE2L3P68036 154 aaKnown RBP12.83□□□□□ -0.36
HOMER3-208ENST00000595756 LGALSLQ3ZCW2 172 aaPredicted RBP12.83□□□□□ -0.36
HOMER3-208ENST00000595756 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 ZNF767PQ75MW2 155 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 BLNKQ8WV28 456 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 FXYD5Q96DB9 178 aa12.83□□□□□ -0.36
HOMER3-208ENST00000595756 TEX48A0A1B0GUV7 120 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 UMAD1C9J7I0 102 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 H3BTX0 84 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 SLC17A3O00476 420 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 OR10J4P0C629 311 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 STAG3L3P0CL85 134 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 EIF5AL1Q6IS14 154 aaKnown RBP12.82□□□□□ -0.36
HOMER3-208ENST00000595756 OR4B1Q8NGF8 309 aa12.82□□□□□ -0.36
HOMER3-208ENST00000595756 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
HOMER3-208ENST00000595756 CXorf1O96002 111 aa12.81□□□□□ -0.36
HOMER3-208ENST00000595756 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
HOMER3-208ENST00000595756 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
HOMER3-208ENST00000595756 STOML3Q8TAV4 291 aa12.81□□□□□ -0.36
HOMER3-208ENST00000595756 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
HOMER3-208ENST00000595756 CTXND1A0A1B0GTU2 59 aa12.8□□□□□ -0.36
HOMER3-208ENST00000595756 A8MTW9 85 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms