RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ICAM4Q14773 271 aa9.99□□□□□ -0.81
SHKBP1-207ENST00000595631 KHDC3LQ587J8 217 aa9.99□□□□□ -0.81
SHKBP1-207ENST00000595631 KCNRGQ8N5I3 272 aa9.99□□□□□ -0.81
SHKBP1-207ENST00000595631 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
SHKBP1-207ENST00000595631 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 IGHV4-28A0A0C4DH34 117 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 A0A1W2PPV4 95 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 ZNF705EA8MWA4 302 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 BOLA2-SMG1P6H3BVE0 249 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 RBMY1A1P0DJD3 496 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 RBMY1CP0DJD4 496 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 CDC34P49427 236 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 TAS2R45P59539 299 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 PDE6HQ13956 83 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 ZNF345Q14585 488 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 RBMY1FQ15415 496 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 SSX7Q7RTT5 188 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 RPP25LQ8N5L8 163 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 Q8NAQ8 132 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 ARPC5LQ9BPX5 153 aa9.98□□□□□ -0.81
SHKBP1-207ENST00000595631 TRAV12-2A0A075B6T6 113 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 TAAR5O14804 337 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 CRXO43186 299 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 KIR3DS1Q14943 382 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 IL17DQ8TAD2 202 aa9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 GNPNAT1Q96EK6 184 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-207ENST00000595631 IGKV2-40A0A087WW87 121 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 JTBO76095 146 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 IGKV2D-40P01614 121 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 SERF2P84101 59 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 CD300CQ08708 224 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 ERCC8Q13216 396 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 CASC10Q5T4H9 136 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 TCTE3Q8IZS6 198 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 OR10J6PQ8NGY7 276 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 RAB24Q969Q5 203 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 MRPL53Q96EL3 112 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 Q9H3A6 140 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 C11orf68Q9H3H3 251 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 AAMDCQ9H7C9 122 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.82
SHKBP1-207ENST00000595631 A0A0D9SG52 128 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 NPIPB6E9PJ23 425 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 BCL2L11O43521 198 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 PRM2P04554 102 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 PMS2P11Q13670 270 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 ZNF726P1Q15940 193 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 IGF2BP2-AS1Q96M15 143 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 PRELID1Q9Y255 219 aa9.95□□□□□ -0.82
SHKBP1-207ENST00000595631 J3KRW8 73 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 INSP01308 110 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 MBP02144 154 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 MIFP14174 115 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 PQLC2Q6ZP29 291 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 TMUB2Q71RG4 321 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 ACTR3CQ9C0K3 210 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 PLA2G2EQ9NZK7 142 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
SHKBP1-207ENST00000595631 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 AMBPP02760 352 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 GCHFRP30047 84 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 NANOS2P60321 138 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 AKAP14Q86UN6 197 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 HYLS1Q96M11 299 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 VGLL1Q99990 258 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 AGPAT4-IT1Q9H0P7 198 aa9.93□□□□□ -0.82
SHKBP1-207ENST00000595631 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 PFDN1O60925 122 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 C1QBP02746 253 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 CDKN1BP46527 198 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 LGALSLQ3ZCW2 172 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 AKR1C8PQ5T2L2 129 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 GFI1BQ5VTD9 330 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 TMEM208Q9BTX3 173 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 RPH3ALQ9UNE2 315 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 CELA1Q9UNI1 258 aa9.92□□□□□ -0.82
SHKBP1-207ENST00000595631 CTXND1A0A1B0GTU2 59 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 PGPA6NDG6 321 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 CXorf65A6NEN9 183 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 FHITP49789 147 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 EMP1P54849 157 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 ZNF767PQ75MW2 155 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 LYPD1Q8N2G4 141 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 Q8TAT8 98 aa9.91□□□□□ -0.82
SHKBP1-207ENST00000595631 C11orf45Q8TAV5 145 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms