RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 HIST1H1EP10412 219 aaKnown RBP7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 C12orf74Q32Q52 190 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 FFAR4Q5NUL3 377 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 Q6ZTC4 211 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 ZNF767PQ75MW2 155 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 FXYD5Q96DB9 178 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 AQP10Q96PS8 301 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 GOLT1BQ9Y3E0 138 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 NPIPB6E9PJ23 425 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 JTBO76095 146 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 OR10J4P0C629 311 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 RHOBP62745 196 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 PDE6HQ13956 83 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 EXOC3-AS1Q8N2X6 119 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 SCGB1C1Q8TD33 95 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 ASB13Q8WXK3 278 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 LINC00476Q8WZB0 136 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 OR51M1Q9H341 326 aa7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 KLK5Q9Y337 293 aaPredicted RBP7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
SHKBP1-206ENST00000595523 LOC102723971A0A1B0GUV8 181 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 RNF222A6NCQ9 220 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 NBEAP1P0C6P0 100 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 CT45A10P0DMU9 189 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 CDKN1BP46527 198 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 EMP1P54849 157 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 RPP25LQ8N5L8 163 aaKnown RBP7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 OR10J6PQ8NGY7 276 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 MRPL53Q96EL3 112 aaKnown RBP7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
SHKBP1-206ENST00000595523 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 ZNF705GA8MUZ8 300 aaPredicted RBP7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 C11orf94C9JXX5 98 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 HBE1P02100 147 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 RAB2AP61019 212 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 ERCC8Q13216 396 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 RRN3P1Q2M238 152 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 HSD17B11Q8NBQ5 300 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 OR2T35Q8NGX2 323 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 RNF141Q8WVD5 230 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 TMEM208Q9BTX3 173 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 DKK2Q9UBU2 259 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 TNFSF18Q9UNG2 199 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 YTHDF2Q9Y5A9 579 aaKnown RBP7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 TIMM9Q9Y5J7 89 aa7.84□□□□□ -1.15
SHKBP1-206ENST00000595523 FRAS1Q86XX4 4008 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 FXYD6-FXYD2A0A087WZ82 144 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 TRAV10A0A0B4J240 114 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 OR7C2O60412 319 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 AZU1P20160 251 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 ICAM4Q14773 271 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 GFI1BQ5VTD9 330 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 C2CD4CQ8TF44 421 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 FAM19A4Q96LR4 140 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 ODF3Q96PU9 254 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 PPP1R14DQ9NXH3 145 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 PRELID1Q9Y255 219 aa7.83□□□□□ -1.16
SHKBP1-206ENST00000595523 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 M6PRP20645 277 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 ATP6V0CP27449 155 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 TSPOP30536 169 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 UBE2L3P68036 154 aaKnown RBP7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 ZNF266Q14584 549 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 FAM122CQ6P4D5 195 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 TMEM256Q8N2U0 113 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 OR2G3Q8NGZ4 309 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 VGLL1Q99990 258 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 AGPAT4-IT1Q9H0P7 198 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 SH3BGRL3Q9H299 93 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
SHKBP1-206ENST00000595523 DEFB131BA0A096LNP1 70 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 IGLL5B9A064 214 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 SMLR1H3BR10 107 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 J3KRW8 73 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 LY6G6CO95867 125 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 TAS2R60P59551 318 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 C9orf47Q6ZRZ4 202 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 INO80EQ8NBZ0 244 aaPredicted RBP7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 LINC01587Q99440 93 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 NIPSNAP3BQ9BS92 247 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 PSMG3Q9BT73 122 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms