RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RAB24Q969Q5 203 aa16.73■□□□□ 0.27
PNKP-205ENST00000595081 PHYHIPLQ96FC7 376 aa16.73■□□□□ 0.27
PNKP-205ENST00000595081 TP53TG1Q9Y2A0 90 aa16.73■□□□□ 0.27
PNKP-205ENST00000595081 PRAC2D3DTV9 90 aa16.72■□□□□ 0.27
PNKP-205ENST00000595081 PSG9Q00887 426 aa16.72■□□□□ 0.27
PNKP-205ENST00000595081 HIST1H1AQ02539 215 aaPredicted RBP16.72■□□□□ 0.27
PNKP-205ENST00000595081 HYLS1Q96M11 299 aa16.72■□□□□ 0.27
PNKP-205ENST00000595081 SLC35B3Q9H1N7 401 aa16.72■□□□□ 0.27
PNKP-205ENST00000595081 CLEC5AQ9NY25 188 aa16.72■□□□□ 0.27
PNKP-205ENST00000595081 M0R3E3 92 aa16.71■□□□□ 0.27
PNKP-205ENST00000595081 NUTF2P61970 127 aaKnown RBP16.71■□□□□ 0.27
PNKP-205ENST00000595081 SSX7Q7RTT5 188 aa16.71■□□□□ 0.27
PNKP-205ENST00000595081 CLUHP3Q96NS8 147 aa16.71■□□□□ 0.27
PNKP-205ENST00000595081 ACTR3CQ9C0K3 210 aaPredicted RBP16.71■□□□□ 0.27
PNKP-205ENST00000595081 XCL2Q9UBD3 114 aa16.71■□□□□ 0.27
PNKP-205ENST00000595081 A8MTW9 85 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 DUSP14O95147 198 aaKnown RBP16.7■□□□□ 0.26
PNKP-205ENST00000595081 STAG3L2P0CL84 134 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 STAG3L3P0CL85 134 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 ARL14EPLP0DKL9 152 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 ICAM4Q14773 271 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 AKR1C8PQ5T2L2 129 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 AMTNQ6UX39 209 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 PQLC2Q6ZP29 291 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 AAMDCQ9H7C9 122 aa16.7■□□□□ 0.26
PNKP-205ENST00000595081 RANP62826 216 aaKnown RBP16.69■□□□□ 0.26
PNKP-205ENST00000595081 ZNF726P1Q15940 193 aa16.69■□□□□ 0.26
PNKP-205ENST00000595081 ZFP69Q49AA0 526 aa16.68■□□□□ 0.26
PNKP-205ENST00000595081 CSNK1G2-AS1Q8NCQ2 148 aa16.68■□□□□ 0.26
PNKP-205ENST00000595081 MRPL53Q96EL3 112 aaKnown RBP16.68■□□□□ 0.26
PNKP-205ENST00000595081 PLA2G2EQ9NZK7 142 aa16.68■□□□□ 0.26
PNKP-205ENST00000595081 PRELID1Q9Y255 219 aa16.68■□□□□ 0.26
PNKP-205ENST00000595081 Q9H3A6 140 aa16.67■□□□□ 0.26
PNKP-205ENST00000595081 SEC11BP0C7V7 166 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 TPT1P13693 172 aaKnown RBP16.66■□□□□ 0.26
PNKP-205ENST00000595081 GCHFRP30047 84 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 EIF5AP63241 154 aaKnown RBP16.66■□□□□ 0.26
PNKP-205ENST00000595081 BAP18Q8IXM2 172 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 C9orf62Q8N4C0 152 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 OR10J6PQ8NGY7 276 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 OR11H2Q8NH07 326 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 C1QTNF4Q9BXJ3 329 aa16.66■□□□□ 0.26
PNKP-205ENST00000595081 CTXND1A0A1B0GTU2 59 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 M0R2Z0 102 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 SPINK13Q1W4C9 94 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 STOML3Q8TAV4 291 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 TMED6Q8WW62 240 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 RARRES2Q99969 163 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 EDA2RQ9HAV5 297 aa16.65■□□□□ 0.26
PNKP-205ENST00000595081 BOLA2-SMG1P6H3BVE0 249 aa16.64■□□□□ 0.25
PNKP-205ENST00000595081 CXorf1O96002 111 aa16.64■□□□□ 0.25
PNKP-205ENST00000595081 FHITP49789 147 aa16.64■□□□□ 0.25
PNKP-205ENST00000595081 LYPD1Q8N2G4 141 aa16.64■□□□□ 0.25
PNKP-205ENST00000595081 WWC2-AS2Q96NR7 200 aa16.64■□□□□ 0.25
PNKP-205ENST00000595081 IGKV2-40A0A087WW87 121 aaPredicted RBP16.63■□□□□ 0.25
PNKP-205ENST00000595081 IGKV2D-40P01614 121 aaPredicted RBP16.63■□□□□ 0.25
PNKP-205ENST00000595081 IQCF2Q8IXL9 164 aa16.63■□□□□ 0.25
PNKP-205ENST00000595081 PPP1R14DQ9NXH3 145 aa16.63■□□□□ 0.25
PNKP-205ENST00000595081 NPIPB6E9PJ23 425 aa16.62■□□□□ 0.25
PNKP-205ENST00000595081 FGF8P55075 233 aaPredicted RBP16.62■□□□□ 0.25
PNKP-205ENST00000595081 ERCC8Q13216 396 aa16.62■□□□□ 0.25
PNKP-205ENST00000595081 A0A0J9YWU9 116 aa16.61■□□□□ 0.25
PNKP-205ENST00000595081 CT45A10P0DMU9 189 aa16.61■□□□□ 0.25
PNKP-205ENST00000595081 NKX2-5P52952 324 aaPredicted RBP16.61■□□□□ 0.25
PNKP-205ENST00000595081 SUN5Q8TC36 379 aa16.61■□□□□ 0.25
PNKP-205ENST00000595081 TMPRSS5Q9H3S3 457 aa16.61■□□□□ 0.25
PNKP-205ENST00000595081 OTORQ9NRC9 128 aa16.61■□□□□ 0.25
PNKP-205ENST00000595081 TRAV12-2A0A075B6T6 113 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 MAP1LC3B2A6NCE7 125 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 PGPA6NDG6 321 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 ZNF705EA8MWA4 302 aaPredicted RBP16.6■□□□□ 0.25
PNKP-205ENST00000595081 UMAD1C9J7I0 102 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 CRXO43186 299 aaPredicted RBP16.6■□□□□ 0.25
PNKP-205ENST00000595081 FAM213BQ8TBF2 198 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 IGF2BP2-AS1Q96M15 143 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 MAP1LC3BQ9GZQ8 125 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 TMEM167BQ9NRX6 74 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 X6R8D5 127 aa16.6■□□□□ 0.25
PNKP-205ENST00000595081 IGHV3OR16-12A0A075B7B8 117 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 AMBPP02760 352 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 CSN1S1P47710 185 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 SLC51BQ86UW2 128 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 VGLL1Q99990 258 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 AGPAT4-IT1Q9H0P7 198 aa16.59■□□□□ 0.25
PNKP-205ENST00000595081 DEFB4AO15263 64 aa16.58■□□□□ 0.24
PNKP-205ENST00000595081 KIR3DS1Q14943 382 aa16.58■□□□□ 0.24
PNKP-205ENST00000595081 ZNF705AQ6ZN79 300 aaPredicted RBP16.58■□□□□ 0.24
PNKP-205ENST00000595081 C1orf158Q8N1D5 194 aa16.58■□□□□ 0.24
PNKP-205ENST00000595081 RPH3ALQ9UNE2 315 aa16.58■□□□□ 0.24
PNKP-205ENST00000595081 DNAH7Q8WXX0 4024 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 INSP01308 110 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 CDKN1BP46527 198 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 FAM74A1Q5RGS3 127 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 C9orf47Q6ZRZ4 202 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 Q8NAQ8 132 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 CMTM2Q8TAZ6 248 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 GOLT1BQ9Y3E0 138 aa16.57■□□□□ 0.24
PNKP-205ENST00000595081 IGHV4-28A0A0C4DH34 117 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 DIRC3C9JPN6 131 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 J3KRW8 73 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms