RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 J3KRW8 73 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 CCSO14618 274 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 M6PRP20645 277 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 S100A7P31151 101 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 TAS2R30P59541 319 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 OR5I1Q13606 314 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 CLINT1Q14677 625 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 Q6ZTI0 123 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 ZNF546Q86UE3 836 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 C11orf72Q8NBR9 251 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 LRRC20Q8TCA0 184 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
USE1-203ENST00000593597 C20orf144Q9BQM9 153 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 SLC50A1Q9BRV3 221 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 PPP1R14DQ9NXH3 145 aa7.34□□□□□ -1.23
USE1-203ENST00000593597 A0A096LPF7 62 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 FUSP35637 526 aaKnown RBP eCLIP7.33□□□□□ -1.24
USE1-203ENST00000593597 PXDC1Q5TGL8 231 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 MIC13Q5XKP0 118 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 Q6ZQT7 251 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 ZNF431Q8TF32 576 aaPredicted RBP7.33□□□□□ -1.24
USE1-203ENST00000593597 MITD1Q8WV92 249 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 ZNF503Q96F45 646 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 MGAT4CQ9UBM8 478 aa7.33□□□□□ -1.24
USE1-203ENST00000593597 MRPS16Q9Y3D3 137 aaKnown RBP7.33□□□□□ -1.24
USE1-203ENST00000593597 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 NAP1L6A6NFF2 107 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 M0R3E3 92 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 GOSR2O14653 212 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
USE1-203ENST00000593597 S100A5P33763 92 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 ERCC8Q13216 396 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 PRR9Q5T870 116 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 BPIFA4PQ86YQ2 179 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 OR10J6PQ8NGY7 276 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 FAM19A4Q96LR4 140 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 ODF3Q96PU9 254 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 GSKIPQ9P0R6 139 aa7.32□□□□□ -1.24
USE1-203ENST00000593597 H3BNG1 76 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 PLA2G10O15496 165 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 NDUFB4O95168 129 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 RLN2P04090 185 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 LINC00315P59091 139 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 CD300CQ08708 224 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 DAZ2Q13117 558 aaKnown RBP7.31□□□□□ -1.24
USE1-203ENST00000593597 BTN1A1Q13410 526 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 C4orf46Q504U0 113 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 C10orf113Q5VZT2 155 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 NRARPQ7Z6K4 114 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 GGACTQ9BVM4 153 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 PXMP4Q9Y6I8 212 aa7.31□□□□□ -1.24
USE1-203ENST00000593597 A0A1W2PPQ1 181 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 FAM24AA6NFZ4 105 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 CCDC160A6NGH7 325 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 SNURFLB1AK76 121 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 KLLNB2CW77 178 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 ZNF324O75467 553 aaPredicted RBP7.3□□□□□ -1.24
USE1-203ENST00000593597 CST7O76096 145 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 IL7P13232 177 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 LEPP41159 167 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 CAMLGP49069 296 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 VWC2Q2TAL6 325 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 TTC32Q5I0X7 151 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 SPANXN2Q5MJ10 180 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 TRIQKQ629K1 86 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 SEC22CQ9BRL7 303 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 TNFRSF18Q9Y5U5 241 aa7.3□□□□□ -1.24
USE1-203ENST00000593597 TRBV19A0A075B6N1 114 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 IGSF23A1L1A6 192 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 C7orf71A4D174 169 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 ZNF253O75346 499 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 PYYP10082 97 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 IL15RAQ13261 267 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 GCSAMLQ5JQS6 135 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 CCDC28AQ8IWP9 274 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 C18orf15Q96N68 181 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 AGPAT4-IT1Q9H0P7 198 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 C20orf85Q9H1P6 137 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 DNAJC4Q9NNZ3 241 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 TP53TG3Q9ULZ0 132 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 KLF12Q9Y4X4 402 aa7.29□□□□□ -1.24
USE1-203ENST00000593597 LSM5Q9Y4Y9 91 aaKnown RBP7.29□□□□□ -1.24
USE1-203ENST00000593597 SRRM2Q9UQ35 2752 aaKnown RBP7.29□□□□□ -1.24
USE1-203ENST00000593597 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
USE1-203ENST00000593597 UBE2L5PA0A1B0GUS4 154 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 SPINK4O60575 86 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 EXOC3-AS1Q8N2X6 119 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 LINC00467Q9BRT7 94 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 SLC39A9Q9NUM3 307 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 RNF24Q9Y225 148 aa7.28□□□□□ -1.24
USE1-203ENST00000593597 IGKV2-40A0A087WW87 121 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms